@HD	VN:1.4	SO:coordinate
@RG	ID:grp1	DS:Group 1	LB:Library 1	SM:Sample
@RG	ID:grp2	DS:Group 2	LB:Library 2	SM:Sample
@PG	ID:prog1	PN:emacs	CL:emacs	VN:23.1.1
@CO	The MIT License
@CO	
@CO	Copyright (c) 2014 Genome Research Ltd.
@CO	
@CO	Permission is hereby granted, free of charge, to any person obtaining a copy
@CO	of this software and associated documentation files (the "Software"), to deal
@CO	in the Software without restriction, including without limitation the rights
@CO	to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
@CO	copies of the Software, and to permit persons to whom the Software is
@CO	furnished to do so, subject to the following conditions:
@CO	
@CO	The above copyright notice and this permission notice shall be included in
@CO	all copies or substantial portions of the Software.
@CO	
@CO	THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
@CO	IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
@CO	FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
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@CO	LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
@CO	OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
@CO	THE SOFTWARE.
@SQ	SN:ref1	LN:56	M5:08c04d512d4797d9ba2a156c1daba468
@SQ	SN:ref2	LN:60	M5:7c35feac7036c1cdef3bee0cc4b21437
@SQ	SN:ref3_unused	LN:70	M5:5fdd18c2c6ecac4838996d029bf395b5
ref2_grp3_p001	83	ref2	1	99	15M	=	31	45	ATTCTATAGTGTCAC	~~~~~~~~~~~~~~~	NM:i:0	MD:Z:15
ref2_grp3_p002	147	ref2	16	99	15M	=	46	45	CTAAATAGCTTGGCG	}}}}}}}}}}}}}}}	NM:i:0	MD:Z:15
ref2_grp3_p001	163	ref2	31	99	15M	=	1	-45	CTGTTTCCTGTGTGA	|||||||||||||||	NM:i:13	MD:Z:0T0A0A1C0A0T0G0G0T0C0A1A0G0
ref2_grp3_p002	99	ref2	46	99	15M	=	16	-45	CTGTTTCCTGTGTGA	{{{{{{{{{{{{{{{	NM:i:0	MD:Z:15
unaligned_grp3_p001	77	*	0	0	*	*	0	0	CACTCGTTCATGACG	0123456789abcde
unaligned_grp3_p001	141	*	0	0	*	*	0	0	GAAAGTGAGGAGGTG	edcba9876543210
