{
  "annotations": {
    "gene1": {
      "end": 24,
      "seqid": "data/reference.gff",
      "start": 10,
      "strand": "+",
      "type": "gene"
    },
    "gene2": {
      "end": 47,
      "seqid": "data/reference.gff",
      "start": 36,
      "strand": "-",
      "type": "gene"
    },
    "nuc": {
      "end": 50,
      "seqid": "data/reference.gff",
      "start": 1,
      "strand": "+",
      "type": "##sequence-region pragma"
    }
  },
  "generated_by": {
    "program": "augur",
    "version": "23.1.1"
  },
  "nodes": {
    "node_AB": {
      "aa_muts": {
        "gene1": [
          "P2L"
        ],
        "gene2": [
          "V2D"
        ]
      }
    },
    "node_root": {
      "aa_muts": {
        "gene1": [],
        "gene2": []
      },
      "aa_sequences": {
        "gene1": "MPCG*",
        "gene2": "MVK*"
      }
    },
    "sample_A": {
      "aa_muts": {
        "gene1": [],
        "gene2": []
      }
    },
    "sample_B": {
      "aa_muts": {
        "gene1": [],
        "gene2": []
      }
    },
    "sample_C": {
      "aa_muts": {
        "gene1": [],
        "gene2": []
      }
    }
  },
  "reference": {
    "gene1": "MPCG*",
    "gene2": "MVK*"
  }
}