SeqfileClose_0	SeqfileClose_afp
SeqfileClose_2	SeqfileClose_msa3
SeqfileClose_3	SeqfileClose_afp4
SeqfileClose_5	SeqfileClose_afp7
SetSeqinfoString_0	SetSeqinfoString_sptr.addr.0
SetAlphabet_0	Alphabet_type
DigitizeAlignment_7	DigitizeAlignment_arrayidx8
DigitizeAlignment_27	DigitizeAlignment_arrayidx66
DigitizeAlignment_29	DigitizeAlignment_arrayidx72
CreatePlan7Matrix_16	CreatePlan7Matrix_xmx38
CreatePlan7Matrix_19	CreatePlan7Matrix_mmx40
CreatePlan7Matrix_22	CreatePlan7Matrix_imx43
CreatePlan7Matrix_25	CreatePlan7Matrix_dmx46
P7ViterbiTrace_44	P7ViterbiTrace_tr
CreatePlan7Matrix_26	CreatePlan7Matrix_xmx49
CreatePlan7Matrix_28	CreatePlan7Matrix_xmx52
CreatePlan7Matrix_29	CreatePlan7Matrix_mmx54
CreatePlan7Matrix_31	CreatePlan7Matrix_mmx61
CreatePlan7Matrix_32	CreatePlan7Matrix_imx63
CreatePlan7Matrix_34	CreatePlan7Matrix_imx70
CreatePlan7Matrix_35	CreatePlan7Matrix_dmx72
CreatePlan7Matrix_37	CreatePlan7Matrix_dmx79
P7Forward_132	P7Forward_mmx
P7Forward_133	P7Forward_arrayidx235
P7Forward_135	P7Forward_xmx
P7Forward_136	P7Forward_arrayidx240
P7Forward_139	P7Forward_xmx
P7Forward_140	P7Forward_arrayidx247
AllocShadowMatrix_13	AllocShadowMatrix_xtb22
AllocShadowMatrix_15	AllocShadowMatrix_mtb27
AllocShadowMatrix_17	AllocShadowMatrix_itb34
AllocShadowMatrix_19	AllocShadowMatrix_dtb41
AllocShadowMatrix_20	AllocShadowMatrix_xtb44
AllocShadowMatrix_22	AllocShadowMatrix_xtb47
AllocShadowMatrix_23	AllocShadowMatrix_mtb49
AllocShadowMatrix_25	AllocShadowMatrix_mtb56
AllocShadowMatrix_26	AllocShadowMatrix_itb58
AllocShadowMatrix_28	AllocShadowMatrix_itb65
AllocShadowMatrix_29	AllocShadowMatrix_dtb67
AllocShadowMatrix_31	AllocShadowMatrix_dtb74
FreeShadowMatrix_0	FreeShadowMatrix_xtb
FreeShadowMatrix_2	FreeShadowMatrix_mtb
FreeShadowMatrix_4	FreeShadowMatrix_itb
FreeShadowMatrix_6	FreeShadowMatrix_dtb
P7Forward_1	P7Forward_xmx
P7Forward_4	P7Forward_xmx
P7Forward_5	P7Forward_arrayidx4
P7Forward_6	P7Forward_xmx
P7Forward_8	P7Forward_xmx
P7Forward_10	P7Forward_xmx
P7Forward_13	P7Forward_dmx
P7Forward_15	P7Forward_imx
P7Forward_17	P7Forward_mmx
P7Forward_19	P7Forward_dmx
P7Forward_21	P7Forward_imx
P7Forward_23	P7Forward_mmx
P7Forward_26	P7Forward_mmx
P7Forward_27	P7Forward_arrayidx40
P7Forward_32	P7Forward_imx
P7Forward_33	P7Forward_arrayidx51
P7Forward_38	P7Forward_xmx
P7Forward_39	P7Forward_arrayidx62
P7Forward_43	P7Forward_dmx
P7Forward_44	P7Forward_arrayidx71
P7Forward_49	P7Forward_mmx
P7Forward_50	P7Forward_arrayidx83
P7Forward_55	P7Forward_mmx
P7Forward_56	P7Forward_arrayidx93
P7Forward_58	P7Forward_mmx
P7Forward_59	P7Forward_arrayidx99
P7Forward_64	P7Forward_dmx
P7Forward_65	P7Forward_arrayidx110
P7Forward_70	P7Forward_dmx
P7Forward_71	P7Forward_arrayidx121
P7Forward_72	P7Forward_mmx
P7Forward_73	P7Forward_arrayidx126
P7Forward_78	P7Forward_imx
P7Forward_79	P7Forward_arrayidx136
P7Forward_84	P7Forward_imx
P7Forward_85	P7Forward_arrayidx146
P7Forward_90	P7Forward_imx
P7Forward_91	P7Forward_arrayidx157
P7Forward_94	P7Forward_mmx
P7Forward_95	P7Forward_arrayidx168
P7Forward_102	P7Forward_imx
P7Forward_103	P7Forward_arrayidx182
P7Forward_109	P7Forward_xmx
P7Forward_110	P7Forward_arrayidx194
P7Forward_116	P7Forward_dmx
P7Forward_117	P7Forward_arrayidx207
P7Forward_124	P7Forward_mmx
P7Forward_125	P7Forward_arrayidx221
P7ViterbiTrace_220	P7ViterbiTrace_pos478
P7ViterbiTrace_224	P7ViterbiTrace_tr
P7ViterbiTrace_230	P7ViterbiTrace_tr
P7Forward_141	P7Forward_xmx
P7Forward_144	P7Forward_xmx
P7Forward_145	P7Forward_arrayidx258
P7Forward_147	P7Forward_mmx
P7Forward_148	P7Forward_arrayidx262
P7Forward_152	P7Forward_xmx
P7Forward_153	P7Forward_arrayidx269
P7Forward_154	P7Forward_xmx
P7Forward_155	P7Forward_arrayidx276
P7Forward_158	P7Forward_xmx
P7Forward_159	P7Forward_arrayidx283
P7Forward_162	P7Forward_xmx
P7Forward_163	P7Forward_arrayidx291
P7Forward_164	P7Forward_xmx
P7Forward_165	P7Forward_arrayidx294
P7Forward_168	P7Forward_xmx
P7Forward_169	P7Forward_arrayidx301
P7Forward_172	P7Forward_xmx
P7Forward_173	P7Forward_arrayidx309
P7Forward_174	P7Forward_xmx
P7Forward_175	P7Forward_arrayidx313
P7Forward_178	P7Forward_xmx
P7Forward_179	P7Forward_arrayidx320
P7Forward_182	P7Forward_xmx
P7Forward_183	P7Forward_arrayidx328
P7Forward_184	P7Forward_xmx
P7Forward_185	P7Forward_arrayidx334
P7ViterbiTrace_4	P7ViterbiTrace_tr
P7ViterbiTrace_6	P7ViterbiTrace_tr
P7ViterbiTrace_8	P7ViterbiTrace_tr
P7ViterbiTrace_10	P7ViterbiTrace_tr
P7ViterbiTrace_12	P7ViterbiTrace_tr
P7ViterbiTrace_14	P7ViterbiTrace_tr
P7ViterbiTrace_16	P7ViterbiTrace_tr
P7ViterbiTrace_17	P7ViterbiTrace_statetype13
P7ViterbiTrace_19	P7ViterbiTrace_tr
P7ViterbiTrace_20	P7ViterbiTrace_statetype18
P7ViterbiTrace_28	P7ViterbiTrace_tr
P7ViterbiTrace_38	P7ViterbiTrace_tr
P7ViterbiTrace_40	P7ViterbiTrace_tr
P7ViterbiTrace_41	P7ViterbiTrace_nodeidx70
P7ViterbiTrace_42	P7ViterbiTrace_tr
P7ParsingViterbi_135	P7ParsingViterbi_imx
P7ParsingViterbi_137	P7ParsingViterbi_mmx
P7ParsingViterbi_138	P7ParsingViterbi_arrayidx266
P7ViterbiTrace_45	P7ViterbiTrace_tr
P7ViterbiTrace_47	P7ViterbiTrace_tr
P7ViterbiTrace_49	P7ViterbiTrace_tr
P7ViterbiTrace_56	P7ViterbiTrace_tr
P7ViterbiTrace_58	P7ViterbiTrace_tr
P7ViterbiTrace_59	P7ViterbiTrace_nodeidx106
P7ViterbiTrace_60	P7ViterbiTrace_tr
P7ViterbiTrace_61	P7ViterbiTrace_pos110
P7ViterbiTrace_67	P7ViterbiTrace_tr
P7ViterbiTrace_69	P7ViterbiTrace_tr
P7ViterbiTrace_70	P7ViterbiTrace_nodeidx129
P7ViterbiTrace_71	P7ViterbiTrace_tr
P7ViterbiTrace_72	P7ViterbiTrace_pos133
P7ViterbiTrace_78	P7ViterbiTrace_tr
P7ViterbiTrace_80	P7ViterbiTrace_tr
P7ViterbiTrace_81	P7ViterbiTrace_nodeidx153
P7ViterbiTrace_82	P7ViterbiTrace_tr
P7ViterbiTrace_87	P7ViterbiTrace_tr
P7ViterbiTrace_95	P7ViterbiTrace_tr
P7ViterbiTrace_97	P7ViterbiTrace_tr
P7ViterbiTrace_98	P7ViterbiTrace_nodeidx196
P7ViterbiTrace_99	P7ViterbiTrace_tr
P7ViterbiTrace_100	P7ViterbiTrace_pos200
P7ViterbiTrace_108	P7ViterbiTrace_tr
P7ViterbiTrace_110	P7ViterbiTrace_tr
P7ViterbiTrace_111	P7ViterbiTrace_nodeidx225
P7ViterbiTrace_112	P7ViterbiTrace_tr
P7ViterbiTrace_121	P7ViterbiTrace_tr
P7ViterbiTrace_127	P7ViterbiTrace_tr
P7ViterbiTrace_129	P7ViterbiTrace_tr
P7ViterbiTrace_130	P7ViterbiTrace_nodeidx270
P7ViterbiTrace_131	P7ViterbiTrace_tr
P7ViterbiTrace_132	P7ViterbiTrace_pos274
P7ViterbiTrace_138	P7ViterbiTrace_tr
P7ViterbiTrace_140	P7ViterbiTrace_tr
P7ViterbiTrace_141	P7ViterbiTrace_nodeidx293
P7ViterbiTrace_142	P7ViterbiTrace_tr
P7ViterbiTrace_143	P7ViterbiTrace_pos297
P7ViterbiTrace_147	P7ViterbiTrace_tr
P7ViterbiTrace_149	P7ViterbiTrace_tr
P7ViterbiTrace_151	P7ViterbiTrace_tr
P7ViterbiTrace_158	P7ViterbiTrace_tr
P7ViterbiTrace_160	P7ViterbiTrace_tr
P7ViterbiTrace_162	P7ViterbiTrace_tr
P7ViterbiTrace_164	P7ViterbiTrace_tr
P7ViterbiTrace_165	P7ViterbiTrace_pos350
P7ViterbiTrace_169	P7ViterbiTrace_tr
P7ViterbiTrace_175	P7ViterbiTrace_tr
P7ViterbiTrace_177	P7ViterbiTrace_tr
P7ViterbiTrace_179	P7ViterbiTrace_tr
P7ViterbiTrace_186	P7ViterbiTrace_tr
P7ViterbiTrace_188	P7ViterbiTrace_tr
P7ViterbiTrace_190	P7ViterbiTrace_tr
P7ViterbiTrace_195	P7ViterbiTrace_tr
Plan7ESTViterbi_44	Plan7ESTViterbi_dmx
Plan7ESTViterbi_46	Plan7ESTViterbi_imx
Plan7ESTViterbi_48	Plan7ESTViterbi_mmx
P7ViterbiTrace_208	P7ViterbiTrace_tr
P7ViterbiTrace_210	P7ViterbiTrace_tr
P7ViterbiTrace_211	P7ViterbiTrace_nodeidx456
P7ViterbiTrace_212	P7ViterbiTrace_tr
P7ViterbiTrace_214	P7ViterbiTrace_tr
P7ViterbiTrace_215	P7ViterbiTrace_tr
P7ViterbiTrace_217	P7ViterbiTrace_tr
P7ViterbiTrace_218	P7ViterbiTrace_nodeidx474
P7ViterbiTrace_219	P7ViterbiTrace_tr
get_wee_midpt_444	get_wee_midpt_arrayidx1015
get_wee_midpt_446	get_wee_midpt_mmx
get_wee_midpt_447	get_wee_midpt_arrayidx1022
get_wee_midpt_452	get_wee_midpt_mmx
get_wee_midpt_453	get_wee_midpt_arrayidx1038
get_wee_midpt_455	get_wee_midpt_dmx
get_wee_midpt_457	get_wee_midpt_mmx
get_wee_midpt_458	get_wee_midpt_arrayidx1049
get_wee_midpt_463	get_wee_midpt_dmx
get_wee_midpt_464	get_wee_midpt_arrayidx1061
get_wee_midpt_465	get_wee_midpt_dmx
get_wee_midpt_466	get_wee_midpt_arrayidx1067
get_wee_midpt_471	get_wee_midpt_dmx
get_wee_midpt_472	get_wee_midpt_arrayidx1076
P7ViterbiTrace_232	P7ViterbiTrace_tr
P7ViterbiTrace_234	P7ViterbiTrace_tr
P7ViterbiTrace_236	P7ViterbiTrace_tr
P7ViterbiTrace_237	P7ViterbiTrace_pos522
P7ViterbiTrace_243	P7ViterbiTrace_tr
P7ViterbiTrace_245	P7ViterbiTrace_tr
P7ViterbiTrace_247	P7ViterbiTrace_tr
P7ViterbiTrace_252	P7ViterbiTrace_tr
P7ViterbiTrace_258	P7ViterbiTrace_tr
P7ViterbiTrace_260	P7ViterbiTrace_tr
P7ViterbiTrace_262	P7ViterbiTrace_tr
P7ViterbiTrace_264	P7ViterbiTrace_tr
P7ViterbiTrace_265	P7ViterbiTrace_pos585
P7ViterbiTrace_271	P7ViterbiTrace_tr
P7ViterbiTrace_273	P7ViterbiTrace_tr
P7ViterbiTrace_275	P7ViterbiTrace_tr
P7ViterbiTrace_279	P7ViterbiTrace_tr
P7ViterbiTrace_280	P7ViterbiTrace_tr
P7ViterbiTrace_281	P7ViterbiTrace_tr
P7SmallViterbi_0	P7SmallViterbi_ctr
P7SmallViterbi_1	P7SmallViterbi_ctr
P7SmallViterbi_5	P7SmallViterbi_ctr
P7SmallViterbi_6	P7SmallViterbi_pos7
P7SmallViterbi_8	P7SmallViterbi_ctr
P7SmallViterbi_9	P7SmallViterbi_pos11
P7SmallViterbi_12	P7SmallViterbi_ctr
P7SmallViterbi_13	P7SmallViterbi_pos21
P7SmallViterbi_15	P7SmallViterbi_arrayidx38
P7SmallViterbi_17	P7SmallViterbi_tr
P7SmallViterbi_18	P7SmallViterbi_tr
P7SmallViterbi_20	P7SmallViterbi_tr
P7SmallViterbi_22	P7SmallViterbi_tr
P7SmallViterbi_24	P7SmallViterbi_tr
P7SmallViterbi_26	P7SmallViterbi_tr
P7SmallViterbi_28	P7SmallViterbi_tr
P7SmallViterbi_30	P7SmallViterbi_ctr
P7SmallViterbi_31	P7SmallViterbi_pos60
P7SmallViterbi_33	P7SmallViterbi_tr
P7SmallViterbi_35	P7SmallViterbi_tr
P7SmallViterbi_37	P7SmallViterbi_tr
P7SmallViterbi_38	P7SmallViterbi_pos72
P7SmallViterbi_39	P7SmallViterbi_arrayidx84
P7SmallViterbi_41	P7SmallViterbi_arrayidx92
P7SmallViterbi_42	P7SmallViterbi_statetype93
P7SmallViterbi_44	P7SmallViterbi_tr
P7SmallViterbi_45	P7SmallViterbi_statetype96
P7SmallViterbi_46	P7SmallViterbi_arrayidx100
P7SmallViterbi_47	P7SmallViterbi_nodeidx101
P7SmallViterbi_49	P7SmallViterbi_tr
P7SmallViterbi_50	P7SmallViterbi_nodeidx104
P7SmallViterbi_51	P7SmallViterbi_arrayidx108
P7SmallViterbi_52	P7SmallViterbi_pos109
P7SmallViterbi_54	P7SmallViterbi_arrayidx116
P7SmallViterbi_55	P7SmallViterbi_pos117
P7SmallViterbi_57	P7SmallViterbi_ctr
P7SmallViterbi_58	P7SmallViterbi_pos122
P7SmallViterbi_60	P7SmallViterbi_tr
P7SmallViterbi_61	P7SmallViterbi_pos126
P7SmallViterbi_62	P7SmallViterbi_tr
P7SmallViterbi_64	P7SmallViterbi_tr
P7SmallViterbi_65	P7SmallViterbi_statetype142
P7SmallViterbi_66	P7SmallViterbi_tr
P7SmallViterbi_68	P7SmallViterbi_tr
P7SmallViterbi_70	P7SmallViterbi_ctr
P7SmallViterbi_71	P7SmallViterbi_pos158
P7SmallViterbi_73	P7SmallViterbi_ctr
P7SmallViterbi_74	P7SmallViterbi_pos166
P7SmallViterbi_76	P7SmallViterbi_tr
P7SmallViterbi_78	P7SmallViterbi_tr
P7SmallViterbi_80	P7SmallViterbi_tr
P7SmallViterbi_81	P7SmallViterbi_pos178
P7SmallViterbi_82	P7SmallViterbi_ctr
P7SmallViterbi_83	P7SmallViterbi_pos190
P7SmallViterbi_85	P7SmallViterbi_tr
P7SmallViterbi_87	P7SmallViterbi_tr
P7SmallViterbi_89	P7SmallViterbi_tr
P7SmallViterbi_90	P7SmallViterbi_pos204
P7SmallViterbi_91	P7SmallViterbi_tr
P7SmallViterbi_93	P7SmallViterbi_tr
P7SmallViterbi_95	P7SmallViterbi_arrayidx225
P7SmallViterbi_97	P7SmallViterbi_ctr
P7ParsingViterbi_6	P7ParsingViterbi_xmx
P7ParsingViterbi_9	P7ParsingViterbi_xmx
P7ParsingViterbi_10	P7ParsingViterbi_arrayidx11
P7ParsingViterbi_11	P7ParsingViterbi_xmx
P7ParsingViterbi_13	P7ParsingViterbi_xmx
P7ParsingViterbi_15	P7ParsingViterbi_xmx
P7ParsingViterbi_18	P7ParsingViterbi_dmx
P7ParsingViterbi_20	P7ParsingViterbi_imx
P7ParsingViterbi_22	P7ParsingViterbi_mmx
P7ParsingViterbi_24	P7ParsingViterbi_dmx
P7ParsingViterbi_26	P7ParsingViterbi_imx
P7ParsingViterbi_28	P7ParsingViterbi_mmx
P7ParsingViterbi_31	P7ParsingViterbi_mmx
P7ParsingViterbi_33	P7ParsingViterbi_mmx
P7ParsingViterbi_34	P7ParsingViterbi_arrayidx55
P7ParsingViterbi_39	P7ParsingViterbi_mmx
P7ParsingViterbi_40	P7ParsingViterbi_arrayidx66
P7ParsingViterbi_41	P7ParsingViterbi_mtr
P7ParsingViterbi_42	P7ParsingViterbi_arrayidx71
P7ParsingViterbi_44	P7ParsingViterbi_mtr
P7ParsingViterbi_45	P7ParsingViterbi_arrayidx75
P7ParsingViterbi_46	P7ParsingViterbi_imx
P7ParsingViterbi_47	P7ParsingViterbi_arrayidx80
P7ParsingViterbi_52	P7ParsingViterbi_mmx
P7ParsingViterbi_53	P7ParsingViterbi_arrayidx90
P7ParsingViterbi_55	P7ParsingViterbi_mmx
P7ParsingViterbi_56	P7ParsingViterbi_arrayidx97
P7ParsingViterbi_57	P7ParsingViterbi_itr
P7ParsingViterbi_58	P7ParsingViterbi_arrayidx102
P7ParsingViterbi_60	P7ParsingViterbi_mtr
P7ParsingViterbi_61	P7ParsingViterbi_arrayidx106
P7ParsingViterbi_62	P7ParsingViterbi_xmx
P7ParsingViterbi_63	P7ParsingViterbi_arrayidx110
P7ParsingViterbi_67	P7ParsingViterbi_mmx
P7ParsingViterbi_68	P7ParsingViterbi_arrayidx117
P7ParsingViterbi_70	P7ParsingViterbi_mmx
P7ParsingViterbi_71	P7ParsingViterbi_arrayidx124
P7ParsingViterbi_72	P7ParsingViterbi_mtr
P7ParsingViterbi_73	P7ParsingViterbi_arrayidx129
P7ParsingViterbi_74	P7ParsingViterbi_dmx
P7ParsingViterbi_75	P7ParsingViterbi_arrayidx135
P7ParsingViterbi_80	P7ParsingViterbi_mmx
P7ParsingViterbi_81	P7ParsingViterbi_arrayidx145
P7ParsingViterbi_83	P7ParsingViterbi_mmx
P7ParsingViterbi_84	P7ParsingViterbi_arrayidx152
P7ParsingViterbi_85	P7ParsingViterbi_dtr
P7ParsingViterbi_86	P7ParsingViterbi_arrayidx157
P7ParsingViterbi_88	P7ParsingViterbi_mtr
P7ParsingViterbi_89	P7ParsingViterbi_arrayidx161
P7ParsingViterbi_98	P7ParsingViterbi_mmx
P7ParsingViterbi_99	P7ParsingViterbi_arrayidx184
P7ParsingViterbi_101	P7ParsingViterbi_mmx
P7ParsingViterbi_103	P7ParsingViterbi_dmx
P7ParsingViterbi_105	P7ParsingViterbi_mmx
P7ParsingViterbi_106	P7ParsingViterbi_arrayidx199
P7ParsingViterbi_111	P7ParsingViterbi_dmx
P7ParsingViterbi_112	P7ParsingViterbi_arrayidx212
P7ParsingViterbi_113	P7ParsingViterbi_mtr
P7ParsingViterbi_114	P7ParsingViterbi_arrayidx217
P7ParsingViterbi_116	P7ParsingViterbi_dtr
P7ParsingViterbi_117	P7ParsingViterbi_arrayidx221
P7ParsingViterbi_118	P7ParsingViterbi_dmx
P7ParsingViterbi_119	P7ParsingViterbi_arrayidx227
P7ParsingViterbi_124	P7ParsingViterbi_dmx
P7ParsingViterbi_125	P7ParsingViterbi_arrayidx237
P7ParsingViterbi_127	P7ParsingViterbi_dmx
P7ParsingViterbi_128	P7ParsingViterbi_arrayidx244
P7ParsingViterbi_129	P7ParsingViterbi_dtr
P7ParsingViterbi_130	P7ParsingViterbi_arrayidx249
P7ParsingViterbi_132	P7ParsingViterbi_dtr
P7ParsingViterbi_133	P7ParsingViterbi_arrayidx253
get_wee_midpt_9	get_wee_midpt_dmx
get_wee_midpt_11	get_wee_midpt_imx
get_wee_midpt_13	get_wee_midpt_mmx
get_wee_midpt_15	get_wee_midpt_mmx
get_wee_midpt_17	get_wee_midpt_imx
P7ParsingViterbi_143	P7ParsingViterbi_imx
P7ParsingViterbi_144	P7ParsingViterbi_arrayidx278
P7ParsingViterbi_145	P7ParsingViterbi_mtr
P7ParsingViterbi_146	P7ParsingViterbi_arrayidx282
P7ParsingViterbi_148	P7ParsingViterbi_itr
P7ParsingViterbi_149	P7ParsingViterbi_arrayidx286
P7ParsingViterbi_150	P7ParsingViterbi_imx
P7ParsingViterbi_151	P7ParsingViterbi_arrayidx291
P7ParsingViterbi_156	P7ParsingViterbi_imx
P7ParsingViterbi_157	P7ParsingViterbi_arrayidx300
P7ParsingViterbi_159	P7ParsingViterbi_imx
P7ParsingViterbi_160	P7ParsingViterbi_arrayidx307
P7ParsingViterbi_161	P7ParsingViterbi_itr
P7ParsingViterbi_162	P7ParsingViterbi_arrayidx311
P7ParsingViterbi_164	P7ParsingViterbi_itr
P7ParsingViterbi_165	P7ParsingViterbi_arrayidx315
P7ParsingViterbi_174	P7ParsingViterbi_imx
P7ParsingViterbi_175	P7ParsingViterbi_arrayidx338
P7ParsingViterbi_177	P7ParsingViterbi_imx
P7ParsingViterbi_179	P7ParsingViterbi_xmx
P7ParsingViterbi_181	P7ParsingViterbi_xmx
P7ParsingViterbi_182	P7ParsingViterbi_arrayidx355
P7ParsingViterbi_185	P7ParsingViterbi_xmx
P7ParsingViterbi_186	P7ParsingViterbi_arrayidx365
P7ParsingViterbi_187	P7ParsingViterbi_xmx
P7ParsingViterbi_190	P7ParsingViterbi_mmx
P7ParsingViterbi_191	P7ParsingViterbi_arrayidx378
P7ParsingViterbi_195	P7ParsingViterbi_xmx
P7ParsingViterbi_196	P7ParsingViterbi_arrayidx384
P7ParsingViterbi_198	P7ParsingViterbi_xmx
P7ParsingViterbi_199	P7ParsingViterbi_arrayidx390
P7ParsingViterbi_200	P7ParsingViterbi_mtr
P7ParsingViterbi_201	P7ParsingViterbi_arrayidx394
P7ParsingViterbi_203	P7ParsingViterbi_xmx
P7ParsingViterbi_205	P7ParsingViterbi_xmx
P7ParsingViterbi_206	P7ParsingViterbi_arrayidx406
P7ParsingViterbi_209	P7ParsingViterbi_xmx
P7ParsingViterbi_210	P7ParsingViterbi_arrayidx416
P7ParsingViterbi_211	P7ParsingViterbi_xtr
P7ParsingViterbi_212	P7ParsingViterbi_arrayidx419
P7ParsingViterbi_214	P7ParsingViterbi_xtr
P7ParsingViterbi_215	P7ParsingViterbi_arrayidx422
P7ParsingViterbi_216	P7ParsingViterbi_xmx
P7ParsingViterbi_217	P7ParsingViterbi_arrayidx426
P7ParsingViterbi_220	P7ParsingViterbi_xmx
P7ParsingViterbi_221	P7ParsingViterbi_arrayidx433
P7ParsingViterbi_223	P7ParsingViterbi_xmx
P7ParsingViterbi_224	P7ParsingViterbi_arrayidx439
P7ParsingViterbi_225	P7ParsingViterbi_xtr
P7ParsingViterbi_226	P7ParsingViterbi_arrayidx442
P7ParsingViterbi_227	P7ParsingViterbi_xmx
P7ParsingViterbi_229	P7ParsingViterbi_xmx
P7ParsingViterbi_230	P7ParsingViterbi_arrayidx449
P7ParsingViterbi_233	P7ParsingViterbi_xmx
P7ParsingViterbi_234	P7ParsingViterbi_arrayidx459
P7ParsingViterbi_235	P7ParsingViterbi_xmx
P7ParsingViterbi_236	P7ParsingViterbi_arrayidx465
P7ParsingViterbi_239	P7ParsingViterbi_xmx
P7ParsingViterbi_240	P7ParsingViterbi_arrayidx472
P7ParsingViterbi_242	P7ParsingViterbi_xmx
P7ParsingViterbi_243	P7ParsingViterbi_arrayidx478
P7ParsingViterbi_244	P7ParsingViterbi_xtr
P7ParsingViterbi_245	P7ParsingViterbi_arrayidx481
P7ParsingViterbi_247	P7ParsingViterbi_xmx
P7ParsingViterbi_249	P7ParsingViterbi_xmx
P7ParsingViterbi_250	P7ParsingViterbi_arrayidx490
P7ParsingViterbi_253	P7ParsingViterbi_xmx
P7ParsingViterbi_254	P7ParsingViterbi_arrayidx500
P7ParsingViterbi_255	P7ParsingViterbi_xtr
P7ParsingViterbi_256	P7ParsingViterbi_arrayidx503
P7ParsingViterbi_258	P7ParsingViterbi_xtr
P7ParsingViterbi_259	P7ParsingViterbi_arrayidx506
P7ParsingViterbi_260	P7ParsingViterbi_xmx
P7ParsingViterbi_261	P7ParsingViterbi_arrayidx510
P7ParsingViterbi_264	P7ParsingViterbi_xmx
P7ParsingViterbi_265	P7ParsingViterbi_arrayidx517
P7ParsingViterbi_267	P7ParsingViterbi_xmx
P7ParsingViterbi_268	P7ParsingViterbi_arrayidx523
P7ParsingViterbi_269	P7ParsingViterbi_xtr
P7ParsingViterbi_270	P7ParsingViterbi_arrayidx526
P7ParsingViterbi_271	P7ParsingViterbi_xmx
P7ParsingViterbi_272	P7ParsingViterbi_arrayidx533
P7ParsingViterbi_275	P7ParsingViterbi_tr
P7ParsingViterbi_277	P7ParsingViterbi_tr
P7ParsingViterbi_279	P7ParsingViterbi_xtr
P7ParsingViterbi_280	P7ParsingViterbi_arrayidx545
P7ParsingViterbi_282	P7ParsingViterbi_tr
P7ParsingViterbi_283	P7ParsingViterbi_tr
P7ParsingViterbi_285	P7ParsingViterbi_tr
P7ParsingViterbi_286	P7ParsingViterbi_pos555
P7ParsingViterbi_288	P7ParsingViterbi_tr
P7ParsingViterbi_290	P7ParsingViterbi_tr
P7ParsingViterbi_291	P7ParsingViterbi_pos564
P7ParsingViterbi_293	P7ParsingViterbi_tr
P7ParsingViterbi_295	P7ParsingViterbi_tr
P7ParsingViterbi_297	P7ParsingViterbi_tr
P7ParsingViterbi_298	P7ParsingViterbi_tr
P7WeeViterbi_53	P7WeeViterbi_tr
P7WeeViterbi_55	P7WeeViterbi_tr
P7WeeViterbi_57	P7WeeViterbi_tr
P7WeeViterbi_59	P7WeeViterbi_tr
P7WeeViterbi_61	P7WeeViterbi_tr
P7WeeViterbi_63	P7WeeViterbi_tr
P7WeeViterbi_66	P7WeeViterbi_tr
P7WeeViterbi_67	P7WeeViterbi_statetype222
P7WeeViterbi_69	P7WeeViterbi_tr
P7WeeViterbi_71	P7WeeViterbi_tr
P7WeeViterbi_73	P7WeeViterbi_tr
P7WeeViterbi_83	P7WeeViterbi_tr
P7WeeViterbi_85	P7WeeViterbi_tr
P7WeeViterbi_86	P7WeeViterbi_nodeidx263
P7WeeViterbi_87	P7WeeViterbi_tr
P7WeeViterbi_89	P7WeeViterbi_tr
P7WeeViterbi_92	P7WeeViterbi_tr
P7WeeViterbi_93	P7WeeViterbi_nodeidx280
P7WeeViterbi_94	P7WeeViterbi_tr
P7WeeViterbi_95	P7WeeViterbi_pos283
P7WeeViterbi_101	P7WeeViterbi_tr
P7WeeViterbi_103	P7WeeViterbi_tr
P7WeeViterbi_104	P7WeeViterbi_nodeidx319
P7WeeViterbi_105	P7WeeViterbi_tr
P7WeeViterbi_116	P7WeeViterbi_tr
P7WeeViterbi_118	P7WeeViterbi_tr
P7WeeViterbi_119	P7WeeViterbi_nodeidx368
P7WeeViterbi_120	P7WeeViterbi_tr
P7WeeViterbi_122	P7WeeViterbi_tr
P7WeeViterbi_124	P7WeeViterbi_tr
P7WeeViterbi_126	P7WeeViterbi_tr
P7WeeViterbi_128	P7WeeViterbi_tr
P7WeeViterbi_130	P7WeeViterbi_tr
P7WeeViterbi_132	P7WeeViterbi_tr
P7WeeViterbi_134	P7WeeViterbi_tr
P7WeeViterbi_137	P7WeeViterbi_tr
P7WeeViterbi_138	P7WeeViterbi_nodeidx406
P7WeeViterbi_139	P7WeeViterbi_tr
P7WeeViterbi_140	P7WeeViterbi_pos409
P7WeeViterbi_141	P7WeeViterbi_tr
P7WeeViterbi_143	P7WeeViterbi_tr
P7WeeViterbi_145	P7WeeViterbi_tr
P7WeeViterbi_146	P7WeeViterbi_pos420
P7WeeViterbi_147	P7WeeViterbi_tr
P7WeeViterbi_149	P7WeeViterbi_tr
P7WeeViterbi_151	P7WeeViterbi_tr
P7WeeViterbi_152	P7WeeViterbi_pos431
P7WeeViterbi_155	P7WeeViterbi_tr
P7WeeViterbi_157	P7WeeViterbi_tr
P7WeeViterbi_159	P7WeeViterbi_tr
P7WeeViterbi_161	P7WeeViterbi_tr
Plan7ESTViterbi_1	Plan7ESTViterbi_xmx
Plan7ESTViterbi_4	Plan7ESTViterbi_xmx
Plan7ESTViterbi_5	Plan7ESTViterbi_arrayidx4
Plan7ESTViterbi_6	Plan7ESTViterbi_xmx
Plan7ESTViterbi_8	Plan7ESTViterbi_xmx
Plan7ESTViterbi_10	Plan7ESTViterbi_xmx
Plan7ESTViterbi_13	Plan7ESTViterbi_dmx
Plan7ESTViterbi_15	Plan7ESTViterbi_imx
Plan7ESTViterbi_17	Plan7ESTViterbi_mmx
Plan7ESTViterbi_19	Plan7ESTViterbi_xmx
Plan7ESTViterbi_20	Plan7ESTViterbi_arrayidx21
Plan7ESTViterbi_23	Plan7ESTViterbi_xmx
Plan7ESTViterbi_24	Plan7ESTViterbi_arrayidx27
Plan7ESTViterbi_25	Plan7ESTViterbi_xmx
Plan7ESTViterbi_26	Plan7ESTViterbi_arrayidx29
Plan7ESTViterbi_29	Plan7ESTViterbi_xmx
Plan7ESTViterbi_30	Plan7ESTViterbi_arrayidx35
Plan7ESTViterbi_31	Plan7ESTViterbi_xmx
Plan7ESTViterbi_33	Plan7ESTViterbi_xmx
Plan7ESTViterbi_35	Plan7ESTViterbi_xmx
Plan7ESTViterbi_38	Plan7ESTViterbi_dmx
Plan7ESTViterbi_40	Plan7ESTViterbi_imx
Plan7ESTViterbi_42	Plan7ESTViterbi_mmx
Plan7ESTViterbi_57	Plan7ESTViterbi_mmx
Plan7ESTViterbi_58	Plan7ESTViterbi_arrayidx116
Plan7ESTViterbi_63	Plan7ESTViterbi_mmx
Plan7ESTViterbi_64	Plan7ESTViterbi_arrayidx125
Plan7ESTViterbi_65	Plan7ESTViterbi_imx
Plan7ESTViterbi_66	Plan7ESTViterbi_arrayidx131
Plan7ESTViterbi_71	Plan7ESTViterbi_mmx
Plan7ESTViterbi_72	Plan7ESTViterbi_arrayidx141
Plan7ESTViterbi_74	Plan7ESTViterbi_mmx
Plan7ESTViterbi_75	Plan7ESTViterbi_arrayidx148
Plan7ESTViterbi_76	Plan7ESTViterbi_xmx
Plan7ESTViterbi_77	Plan7ESTViterbi_arrayidx153
Plan7ESTViterbi_81	Plan7ESTViterbi_mmx
Plan7ESTViterbi_82	Plan7ESTViterbi_arrayidx160
Plan7ESTViterbi_84	Plan7ESTViterbi_mmx
Plan7ESTViterbi_85	Plan7ESTViterbi_arrayidx167
Plan7ESTViterbi_86	Plan7ESTViterbi_dmx
Plan7ESTViterbi_87	Plan7ESTViterbi_arrayidx174
Plan7ESTViterbi_92	Plan7ESTViterbi_mmx
Plan7ESTViterbi_93	Plan7ESTViterbi_arrayidx184
Plan7ESTViterbi_95	Plan7ESTViterbi_mmx
Plan7ESTViterbi_96	Plan7ESTViterbi_arrayidx191
Plan7ESTViterbi_100	Plan7ESTViterbi_mmx
Plan7ESTViterbi_101	Plan7ESTViterbi_arrayidx200
Plan7ESTViterbi_103	Plan7ESTViterbi_mmx
Plan7ESTViterbi_104	Plan7ESTViterbi_arrayidx208
Plan7ESTViterbi_110	Plan7ESTViterbi_mmx
Plan7ESTViterbi_111	Plan7ESTViterbi_arrayidx219
Plan7ESTViterbi_113	Plan7ESTViterbi_mmx
Plan7ESTViterbi_114	Plan7ESTViterbi_arrayidx226
Plan7ESTViterbi_115	Plan7ESTViterbi_imx
Plan7ESTViterbi_116	Plan7ESTViterbi_arrayidx233
Plan7ESTViterbi_122	Plan7ESTViterbi_mmx
Plan7ESTViterbi_123	Plan7ESTViterbi_arrayidx245
Plan7ESTViterbi_125	Plan7ESTViterbi_mmx
Plan7ESTViterbi_126	Plan7ESTViterbi_arrayidx252
Plan7ESTViterbi_127	Plan7ESTViterbi_xmx
Plan7ESTViterbi_128	Plan7ESTViterbi_arrayidx257
Plan7ESTViterbi_133	Plan7ESTViterbi_mmx
Plan7ESTViterbi_134	Plan7ESTViterbi_arrayidx267
Plan7ESTViterbi_136	Plan7ESTViterbi_mmx
Plan7ESTViterbi_137	Plan7ESTViterbi_arrayidx274
Plan7ESTViterbi_138	Plan7ESTViterbi_dmx
Plan7ESTViterbi_139	Plan7ESTViterbi_arrayidx281
Plan7ESTViterbi_145	Plan7ESTViterbi_mmx
Plan7ESTViterbi_146	Plan7ESTViterbi_arrayidx293
Plan7ESTViterbi_148	Plan7ESTViterbi_mmx
Plan7ESTViterbi_149	Plan7ESTViterbi_arrayidx300
Plan7ESTViterbi_150	Plan7ESTViterbi_mmx
Plan7ESTViterbi_151	Plan7ESTViterbi_arrayidx310
Plan7ESTViterbi_157	Plan7ESTViterbi_mmx
Plan7ESTViterbi_158	Plan7ESTViterbi_arrayidx321
Plan7ESTViterbi_160	Plan7ESTViterbi_mmx
Plan7ESTViterbi_161	Plan7ESTViterbi_arrayidx328
Plan7ESTViterbi_162	Plan7ESTViterbi_imx
Plan7ESTViterbi_163	Plan7ESTViterbi_arrayidx335
Plan7ESTViterbi_169	Plan7ESTViterbi_mmx
Plan7ESTViterbi_170	Plan7ESTViterbi_arrayidx347
Plan7ESTViterbi_172	Plan7ESTViterbi_mmx
Plan7ESTViterbi_173	Plan7ESTViterbi_arrayidx354
Plan7ESTViterbi_174	Plan7ESTViterbi_xmx
Plan7ESTViterbi_175	Plan7ESTViterbi_arrayidx359
Plan7ESTViterbi_180	Plan7ESTViterbi_mmx
Plan7ESTViterbi_181	Plan7ESTViterbi_arrayidx369
Plan7ESTViterbi_183	Plan7ESTViterbi_mmx
Plan7ESTViterbi_184	Plan7ESTViterbi_arrayidx376
Plan7ESTViterbi_185	Plan7ESTViterbi_dmx
Plan7ESTViterbi_186	Plan7ESTViterbi_arrayidx383
Plan7ESTViterbi_192	Plan7ESTViterbi_mmx
Plan7ESTViterbi_193	Plan7ESTViterbi_arrayidx395
Plan7ESTViterbi_195	Plan7ESTViterbi_mmx
Plan7ESTViterbi_196	Plan7ESTViterbi_arrayidx402
Plan7ESTViterbi_197	Plan7ESTViterbi_mmx
Plan7ESTViterbi_198	Plan7ESTViterbi_arrayidx409
Plan7ESTViterbi_203	Plan7ESTViterbi_dmx
Plan7ESTViterbi_204	Plan7ESTViterbi_arrayidx419
Plan7ESTViterbi_205	Plan7ESTViterbi_dmx
Plan7ESTViterbi_206	Plan7ESTViterbi_arrayidx424
Plan7ESTViterbi_211	Plan7ESTViterbi_dmx
Plan7ESTViterbi_212	Plan7ESTViterbi_arrayidx434
Plan7ESTViterbi_214	Plan7ESTViterbi_dmx
Plan7ESTViterbi_215	Plan7ESTViterbi_arrayidx441
Plan7ESTViterbi_216	Plan7ESTViterbi_mmx
Plan7ESTViterbi_217	Plan7ESTViterbi_arrayidx450
Plan7ESTViterbi_222	Plan7ESTViterbi_imx
Plan7ESTViterbi_223	Plan7ESTViterbi_arrayidx459
Plan7ESTViterbi_224	Plan7ESTViterbi_imx
Plan7ESTViterbi_225	Plan7ESTViterbi_arrayidx464
Plan7ESTViterbi_230	Plan7ESTViterbi_imx
Plan7ESTViterbi_231	Plan7ESTViterbi_arrayidx473
Plan7ESTViterbi_233	Plan7ESTViterbi_imx
Plan7ESTViterbi_234	Plan7ESTViterbi_arrayidx480
Plan7ESTViterbi_238	Plan7ESTViterbi_imx
Plan7ESTViterbi_239	Plan7ESTViterbi_arrayidx489
Plan7ESTViterbi_241	Plan7ESTViterbi_mmx
Plan7ESTViterbi_242	Plan7ESTViterbi_arrayidx496
Plan7ESTViterbi_248	Plan7ESTViterbi_imx
Plan7ESTViterbi_249	Plan7ESTViterbi_arrayidx507
Plan7ESTViterbi_251	Plan7ESTViterbi_imx
Plan7ESTViterbi_252	Plan7ESTViterbi_arrayidx514
Plan7ESTViterbi_253	Plan7ESTViterbi_imx
Plan7ESTViterbi_254	Plan7ESTViterbi_arrayidx520
Plan7ESTViterbi_260	Plan7ESTViterbi_imx
Plan7ESTViterbi_261	Plan7ESTViterbi_arrayidx531
Plan7ESTViterbi_263	Plan7ESTViterbi_imx
Plan7ESTViterbi_264	Plan7ESTViterbi_arrayidx538
Plan7ESTViterbi_265	Plan7ESTViterbi_mmx
Plan7ESTViterbi_266	Plan7ESTViterbi_arrayidx547
Plan7ESTViterbi_272	Plan7ESTViterbi_imx
Plan7ESTViterbi_273	Plan7ESTViterbi_arrayidx558
Plan7ESTViterbi_275	Plan7ESTViterbi_imx
Plan7ESTViterbi_276	Plan7ESTViterbi_arrayidx565
Plan7ESTViterbi_277	Plan7ESTViterbi_imx
Plan7ESTViterbi_278	Plan7ESTViterbi_arrayidx571
Plan7ESTViterbi_284	Plan7ESTViterbi_imx
Plan7ESTViterbi_285	Plan7ESTViterbi_arrayidx582
Plan7ESTViterbi_287	Plan7ESTViterbi_imx
Plan7ESTViterbi_288	Plan7ESTViterbi_arrayidx589
Plan7ESTViterbi_289	Plan7ESTViterbi_xmx
Plan7ESTViterbi_290	Plan7ESTViterbi_arrayidx598
Plan7ESTViterbi_293	Plan7ESTViterbi_xmx
Plan7ESTViterbi_294	Plan7ESTViterbi_arrayidx605
Plan7ESTViterbi_296	Plan7ESTViterbi_dmx
Plan7ESTViterbi_297	Plan7ESTViterbi_arrayidx610
Plan7ESTViterbi_299	Plan7ESTViterbi_xmx
Plan7ESTViterbi_300	Plan7ESTViterbi_arrayidx613
Plan7ESTViterbi_302	Plan7ESTViterbi_mmx
Plan7ESTViterbi_303	Plan7ESTViterbi_arrayidx622
Plan7ESTViterbi_307	Plan7ESTViterbi_xmx
Plan7ESTViterbi_308	Plan7ESTViterbi_arrayidx628
Plan7ESTViterbi_310	Plan7ESTViterbi_xmx
Plan7ESTViterbi_311	Plan7ESTViterbi_arrayidx634
Plan7ESTViterbi_312	Plan7ESTViterbi_xmx
Plan7ESTViterbi_313	Plan7ESTViterbi_arrayidx642
Plan7ESTViterbi_316	Plan7ESTViterbi_xmx
Plan7ESTViterbi_317	Plan7ESTViterbi_arrayidx649
Plan7ESTViterbi_318	Plan7ESTViterbi_xmx
Plan7ESTViterbi_319	Plan7ESTViterbi_arrayidx652
Plan7ESTViterbi_322	Plan7ESTViterbi_xmx
Plan7ESTViterbi_323	Plan7ESTViterbi_arrayidx659
Plan7ESTViterbi_325	Plan7ESTViterbi_xmx
Plan7ESTViterbi_326	Plan7ESTViterbi_arrayidx665
Plan7ESTViterbi_327	Plan7ESTViterbi_xmx
Plan7ESTViterbi_328	Plan7ESTViterbi_arrayidx669
Plan7ESTViterbi_331	Plan7ESTViterbi_xmx
Plan7ESTViterbi_332	Plan7ESTViterbi_arrayidx676
Plan7ESTViterbi_333	Plan7ESTViterbi_xmx
Plan7ESTViterbi_334	Plan7ESTViterbi_arrayidx679
Plan7ESTViterbi_337	Plan7ESTViterbi_xmx
Plan7ESTViterbi_338	Plan7ESTViterbi_arrayidx686
Plan7ESTViterbi_340	Plan7ESTViterbi_xmx
Plan7ESTViterbi_341	Plan7ESTViterbi_arrayidx692
Plan7ESTViterbi_342	Plan7ESTViterbi_xmx
Plan7ESTViterbi_343	Plan7ESTViterbi_arrayidx697
Plan7ESTViterbi_346	Plan7ESTViterbi_xmx
Plan7ESTViterbi_347	Plan7ESTViterbi_arrayidx704
Plan7ESTViterbi_348	Plan7ESTViterbi_xmx
Plan7ESTViterbi_349	Plan7ESTViterbi_arrayidx707
Plan7ESTViterbi_352	Plan7ESTViterbi_xmx
Plan7ESTViterbi_353	Plan7ESTViterbi_arrayidx714
Plan7ESTViterbi_355	Plan7ESTViterbi_xmx
Plan7ESTViterbi_356	Plan7ESTViterbi_arrayidx720
Plan7ESTViterbi_357	Plan7ESTViterbi_xmx
Plan7ESTViterbi_358	Plan7ESTViterbi_arrayidx727
P7ViterbiAlignAlignment_10	P7ViterbiAlignAlignment_arrayidx12
P7ViterbiAlignAlignment_11	Alphabet_size
P7ViterbiAlignAlignment_31	P7ViterbiAlignAlignment_arrayidx72
P7ViterbiAlignAlignment_38	P7ViterbiAlignAlignment_arrayidx89
P7ViterbiAlignAlignment_40	P7ViterbiAlignAlignment_arrayidx93
P7ViterbiAlignAlignment_45	P7ViterbiAlignAlignment_xmx
P7ViterbiAlignAlignment_47	P7ViterbiAlignAlignment_xtb
P7ViterbiAlignAlignment_50	P7ViterbiAlignAlignment_xmx
P7ViterbiAlignAlignment_51	P7ViterbiAlignAlignment_arrayidx111
P7ViterbiAlignAlignment_52	P7ViterbiAlignAlignment_xtb
P7ViterbiAlignAlignment_54	P7ViterbiAlignAlignment_xmx
P7ViterbiAlignAlignment_56	P7ViterbiAlignAlignment_xmx
P7ViterbiAlignAlignment_58	P7ViterbiAlignAlignment_xmx
P7ViterbiAlignAlignment_61	P7ViterbiAlignAlignment_xtb
P7ViterbiAlignAlignment_63	P7ViterbiAlignAlignment_xtb
P7ViterbiAlignAlignment_66	P7ViterbiAlignAlignment_dmx
P7ViterbiAlignAlignment_68	P7ViterbiAlignAlignment_imx
P7ViterbiAlignAlignment_70	P7ViterbiAlignAlignment_mmx
P7ViterbiAlignAlignment_72	P7ViterbiAlignAlignment_dtb
P7ViterbiAlignAlignment_74	P7ViterbiAlignAlignment_itb
P7ViterbiAlignAlignment_76	P7ViterbiAlignAlignment_mtb
P7ViterbiAlignAlignment_79	P7ViterbiAlignAlignment_dmx
P7ViterbiAlignAlignment_81	P7ViterbiAlignAlignment_imx
P7ViterbiAlignAlignment_83	P7ViterbiAlignAlignment_mmx
P7ViterbiAlignAlignment_85	P7ViterbiAlignAlignment_dtb
P7ViterbiAlignAlignment_87	P7ViterbiAlignAlignment_itb
P7ViterbiAlignAlignment_89	P7ViterbiAlignAlignment_mtb
P7ViterbiAlignAlignment_92	P7ViterbiAlignAlignment_mmx
P7ViterbiAlignAlignment_94	P7ViterbiAlignAlignment_mtb
P7ViterbiAlignAlignment_96	P7ViterbiAlignAlignment_mmx
P7ViterbiAlignAlignment_97	P7ViterbiAlignAlignment_arrayidx191
P7ViterbiAlignAlignment_102	P7ViterbiAlignAlignment_mmx
P7ViterbiAlignAlignment_103	P7ViterbiAlignAlignment_arrayidx205
P7ViterbiAlignAlignment_108	P7ViterbiAlignAlignment_mmx
P7ViterbiAlignAlignment_109	P7ViterbiAlignAlignment_arrayidx215
P7ViterbiAlignAlignment_111	P7ViterbiAlignAlignment_mmx
P7ViterbiAlignAlignment_112	P7ViterbiAlignAlignment_arrayidx222
P7ViterbiAlignAlignment_113	P7ViterbiAlignAlignment_mtb
P7ViterbiAlignAlignment_115	P7ViterbiAlignAlignment_imx
P7ViterbiAlignAlignment_116	P7ViterbiAlignAlignment_arrayidx232
P7ViterbiAlignAlignment_121	P7ViterbiAlignAlignment_imx
P7ViterbiAlignAlignment_122	P7ViterbiAlignAlignment_arrayidx248
P7ViterbiAlignAlignment_128	P7ViterbiAlignAlignment_mmx
P7ViterbiAlignAlignment_129	P7ViterbiAlignAlignment_arrayidx265
P7ViterbiAlignAlignment_131	P7ViterbiAlignAlignment_mmx
P7ViterbiAlignAlignment_132	P7ViterbiAlignAlignment_arrayidx272
P7ViterbiAlignAlignment_133	P7ViterbiAlignAlignment_mtb
P7ViterbiAlignAlignment_135	P7ViterbiAlignAlignment_xmx
P7ViterbiAlignAlignment_136	P7ViterbiAlignAlignment_arrayidx280
P7ViterbiAlignAlignment_140	P7ViterbiAlignAlignment_mmx
P7ViterbiAlignAlignment_141	P7ViterbiAlignAlignment_arrayidx287
P7ViterbiAlignAlignment_143	P7ViterbiAlignAlignment_mmx
P7ViterbiAlignAlignment_144	P7ViterbiAlignAlignment_arrayidx294
P7ViterbiAlignAlignment_145	P7ViterbiAlignAlignment_mtb
P7ViterbiAlignAlignment_147	P7ViterbiAlignAlignment_dmx
P7ViterbiAlignAlignment_148	P7ViterbiAlignAlignment_arrayidx304
P7ViterbiAlignAlignment_153	P7ViterbiAlignAlignment_dmx
P7ViterbiAlignAlignment_154	P7ViterbiAlignAlignment_arrayidx320
P7ViterbiAlignAlignment_159	P7ViterbiAlignAlignment_mmx
P7ViterbiAlignAlignment_160	P7ViterbiAlignAlignment_arrayidx330
P7ViterbiAlignAlignment_162	P7ViterbiAlignAlignment_mmx
P7ViterbiAlignAlignment_163	P7ViterbiAlignAlignment_arrayidx337
P7ViterbiAlignAlignment_164	P7ViterbiAlignAlignment_mtb
P7ViterbiAlignAlignment_167	P7ViterbiAlignAlignment_arrayidx350
P7ViterbiAlignAlignment_172	P7ViterbiAlignAlignment_mmx
P7ViterbiAlignAlignment_177	P7ViterbiAlignAlignment_arrayidx375
P7ViterbiAlignAlignment_179	P7ViterbiAlignAlignment_mmx
P7ViterbiAlignAlignment_180	P7ViterbiAlignAlignment_arrayidx380
P7ViterbiAlignAlignment_182	P7ViterbiAlignAlignment_dmx
P7ViterbiAlignAlignment_184	P7ViterbiAlignAlignment_dtb
P7ViterbiAlignAlignment_186	P7ViterbiAlignAlignment_mmx
P7ViterbiAlignAlignment_187	P7ViterbiAlignAlignment_arrayidx399
P7ViterbiAlignAlignment_192	P7ViterbiAlignAlignment_mmx
P7ViterbiAlignAlignment_193	P7ViterbiAlignAlignment_arrayidx415
P7ViterbiAlignAlignment_198	P7ViterbiAlignAlignment_dmx
P7ViterbiAlignAlignment_199	P7ViterbiAlignAlignment_arrayidx425
P7ViterbiAlignAlignment_201	P7ViterbiAlignAlignment_dmx
P7ViterbiAlignAlignment_202	P7ViterbiAlignAlignment_arrayidx432
P7ViterbiAlignAlignment_203	P7ViterbiAlignAlignment_dtb
P7ViterbiAlignAlignment_205	P7ViterbiAlignAlignment_dmx
P7ViterbiAlignAlignment_206	P7ViterbiAlignAlignment_arrayidx442
P7ViterbiAlignAlignment_211	P7ViterbiAlignAlignment_dmx
P7ViterbiAlignAlignment_212	P7ViterbiAlignAlignment_arrayidx458
P7ViterbiAlignAlignment_217	P7ViterbiAlignAlignment_dmx
P7ViterbiAlignAlignment_218	P7ViterbiAlignAlignment_arrayidx468
P7ViterbiAlignAlignment_220	P7ViterbiAlignAlignment_dmx
P7ViterbiAlignAlignment_221	P7ViterbiAlignAlignment_arrayidx475
P7ViterbiAlignAlignment_222	P7ViterbiAlignAlignment_dtb
P7ViterbiAlignAlignment_225	P7ViterbiAlignAlignment_imx
P7ViterbiAlignAlignment_227	P7ViterbiAlignAlignment_itb
P7ViterbiAlignAlignment_229	P7ViterbiAlignAlignment_mmx
P7ViterbiAlignAlignment_230	P7ViterbiAlignAlignment_arrayidx496
P7ViterbiAlignAlignment_235	P7ViterbiAlignAlignment_mmx
P7ViterbiAlignAlignment_236	P7ViterbiAlignAlignment_arrayidx510
P7ViterbiAlignAlignment_242	P7ViterbiAlignAlignment_imx
P7ViterbiAlignAlignment_243	P7ViterbiAlignAlignment_arrayidx525
P7ViterbiAlignAlignment_245	P7ViterbiAlignAlignment_imx
P7ViterbiAlignAlignment_246	P7ViterbiAlignAlignment_arrayidx532
P7ViterbiAlignAlignment_247	P7ViterbiAlignAlignment_itb
P7ViterbiAlignAlignment_249	P7ViterbiAlignAlignment_imx
P7ViterbiAlignAlignment_250	P7ViterbiAlignAlignment_arrayidx541
P7ViterbiAlignAlignment_255	P7ViterbiAlignAlignment_imx
P7ViterbiAlignAlignment_256	P7ViterbiAlignAlignment_arrayidx555
P7ViterbiAlignAlignment_263	P7ViterbiAlignAlignment_imx
P7ViterbiAlignAlignment_264	P7ViterbiAlignAlignment_arrayidx574
P7ViterbiAlignAlignment_266	P7ViterbiAlignAlignment_imx
P7ViterbiAlignAlignment_267	P7ViterbiAlignAlignment_arrayidx581
P7ViterbiAlignAlignment_268	P7ViterbiAlignAlignment_itb
P7ViterbiAlignAlignment_271	P7ViterbiAlignAlignment_arrayidx594
P7ViterbiAlignAlignment_276	P7ViterbiAlignAlignment_imx
P7ViterbiAlignAlignment_281	P7ViterbiAlignAlignment_arrayidx619
P7ViterbiAlignAlignment_283	P7ViterbiAlignAlignment_imx
P7ViterbiAlignAlignment_284	P7ViterbiAlignAlignment_arrayidx624
P7ViterbiAlignAlignment_286	P7ViterbiAlignAlignment_xmx
P7ViterbiAlignAlignment_288	P7ViterbiAlignAlignment_xtb
P7ViterbiAlignAlignment_290	P7ViterbiAlignAlignment_xmx
P7ViterbiAlignAlignment_291	P7ViterbiAlignAlignment_arrayidx643
P7ViterbiAlignAlignment_294	P7ViterbiAlignAlignment_xmx
P7ViterbiAlignAlignment_295	P7ViterbiAlignAlignment_arrayidx655
P7ViterbiAlignAlignment_299	P7ViterbiAlignAlignment_xmx
P7ViterbiAlignAlignment_300	P7ViterbiAlignAlignment_arrayidx671
P7ViterbiAlignAlignment_301	P7ViterbiAlignAlignment_xtb
P7ViterbiAlignAlignment_303	P7ViterbiAlignAlignment_xmx
P7ViterbiAlignAlignment_305	P7ViterbiAlignAlignment_xtb
P7ViterbiAlignAlignment_308	P7ViterbiAlignAlignment_mmx
P7ViterbiAlignAlignment_309	P7ViterbiAlignAlignment_arrayidx690
P7ViterbiAlignAlignment_313	P7ViterbiAlignAlignment_mmx
P7ViterbiAlignAlignment_314	P7ViterbiAlignAlignment_arrayidx702
P7ViterbiAlignAlignment_318	P7ViterbiAlignAlignment_xmx
P7ViterbiAlignAlignment_319	P7ViterbiAlignAlignment_arrayidx709
P7ViterbiAlignAlignment_321	P7ViterbiAlignAlignment_xmx
P7ViterbiAlignAlignment_322	P7ViterbiAlignAlignment_arrayidx715
P7ViterbiAlignAlignment_323	P7ViterbiAlignAlignment_esrc718
P7ViterbiAlignAlignment_324	P7ViterbiAlignAlignment_xmx
P7ViterbiAlignAlignment_326	P7ViterbiAlignAlignment_xtb
P7ViterbiAlignAlignment_328	P7ViterbiAlignAlignment_xmx
P7ViterbiAlignAlignment_329	P7ViterbiAlignAlignment_arrayidx731
P7ViterbiAlignAlignment_332	P7ViterbiAlignAlignment_xmx
P7ViterbiAlignAlignment_333	P7ViterbiAlignAlignment_arrayidx743
P7ViterbiAlignAlignment_336	P7ViterbiAlignAlignment_xmx
P7ViterbiAlignAlignment_337	P7ViterbiAlignAlignment_arrayidx750
P7ViterbiAlignAlignment_339	P7ViterbiAlignAlignment_xmx
P7ViterbiAlignAlignment_340	P7ViterbiAlignAlignment_arrayidx756
P7ViterbiAlignAlignment_341	P7ViterbiAlignAlignment_xtb
P7ViterbiAlignAlignment_343	P7ViterbiAlignAlignment_xmx
P7ViterbiAlignAlignment_345	P7ViterbiAlignAlignment_xtb
P7ViterbiAlignAlignment_347	P7ViterbiAlignAlignment_xmx
P7ViterbiAlignAlignment_348	P7ViterbiAlignAlignment_arrayidx769
P7ViterbiAlignAlignment_351	P7ViterbiAlignAlignment_xmx
P7ViterbiAlignAlignment_352	P7ViterbiAlignAlignment_arrayidx781
P7ViterbiAlignAlignment_356	P7ViterbiAlignAlignment_xmx
P7ViterbiAlignAlignment_357	P7ViterbiAlignAlignment_arrayidx797
P7ViterbiAlignAlignment_358	P7ViterbiAlignAlignment_xtb
P7ViterbiAlignAlignment_360	P7ViterbiAlignAlignment_xmx
P7ViterbiAlignAlignment_361	P7ViterbiAlignAlignment_arrayidx804
P7ViterbiAlignAlignment_364	P7ViterbiAlignAlignment_xmx
P7ViterbiAlignAlignment_365	P7ViterbiAlignAlignment_arrayidx816
P7ViterbiAlignAlignment_368	P7ViterbiAlignAlignment_xmx
P7ViterbiAlignAlignment_369	P7ViterbiAlignAlignment_arrayidx823
P7ViterbiAlignAlignment_371	P7ViterbiAlignAlignment_xmx
P7ViterbiAlignAlignment_372	P7ViterbiAlignAlignment_arrayidx829
P7ViterbiAlignAlignment_373	P7ViterbiAlignAlignment_xtb
P7ViterbiAlignAlignment_376	P7ViterbiAlignAlignment_xmx
P7ViterbiAlignAlignment_377	P7ViterbiAlignAlignment_arrayidx841
ShadowTrace_0	ShadowTrace_tr
ShadowTrace_2	ShadowTrace_tr
ShadowTrace_4	ShadowTrace_tr
ShadowTrace_6	ShadowTrace_tr
ShadowTrace_8	ShadowTrace_mtb
ShadowTrace_9	ShadowTrace_arrayidx9
ShadowTrace_11	ShadowTrace_tr
ShadowTrace_12	ShadowTrace_nodeidx12
ShadowTrace_13	ShadowTrace_tr
ShadowTrace_14	ShadowTrace_pos16
ShadowTrace_15	ShadowTrace_tr
ShadowTrace_17	ShadowTrace_itb
ShadowTrace_18	ShadowTrace_arrayidx24
ShadowTrace_20	ShadowTrace_tr
ShadowTrace_21	ShadowTrace_nodeidx27
ShadowTrace_22	ShadowTrace_tr
ShadowTrace_23	ShadowTrace_pos31
ShadowTrace_24	ShadowTrace_tr
ShadowTrace_26	ShadowTrace_dtb
ShadowTrace_27	ShadowTrace_arrayidx40
ShadowTrace_29	ShadowTrace_tr
ShadowTrace_30	ShadowTrace_nodeidx44
ShadowTrace_31	ShadowTrace_tr
ShadowTrace_33	ShadowTrace_tr
ShadowTrace_35	ShadowTrace_xtb
ShadowTrace_36	ShadowTrace_arrayidx55
ShadowTrace_38	ShadowTrace_tr
ShadowTrace_40	ShadowTrace_tr
ShadowTrace_41	ShadowTrace_pos65
ShadowTrace_47	ShadowTrace_tr
ShadowTrace_49	ShadowTrace_tr
ShadowTrace_50	ShadowTrace_nodeidx89
ShadowTrace_51	ShadowTrace_tr
ShadowTrace_53	ShadowTrace_tr
ShadowTrace_54	ShadowTrace_tr
ShadowTrace_56	ShadowTrace_xtb104
ShadowTrace_57	ShadowTrace_arrayidx105
ShadowTrace_59	ShadowTrace_tr
ShadowTrace_61	ShadowTrace_tr
ShadowTrace_63	ShadowTrace_tr
ShadowTrace_65	ShadowTrace_xtb119
ShadowTrace_66	ShadowTrace_arrayidx120
ShadowTrace_68	ShadowTrace_tr
ShadowTrace_70	ShadowTrace_tr
ShadowTrace_71	ShadowTrace_pos134
ShadowTrace_72	ShadowTrace_tr
ShadowTrace_74	ShadowTrace_tr
ShadowTrace_76	ShadowTrace_tr
ShadowTrace_78	ShadowTrace_esrc
ShadowTrace_85	ShadowTrace_tr
ShadowTrace_87	ShadowTrace_tr
ShadowTrace_88	ShadowTrace_nodeidx167
ShadowTrace_89	ShadowTrace_tr
ShadowTrace_91	ShadowTrace_tr
ShadowTrace_92	ShadowTrace_tr
ShadowTrace_94	ShadowTrace_xtb185
ShadowTrace_95	ShadowTrace_arrayidx186
ShadowTrace_97	ShadowTrace_tr
ShadowTrace_99	ShadowTrace_tr
ShadowTrace_100	ShadowTrace_pos200
ShadowTrace_102	ShadowTrace_tr
ShadowTrace_103	ShadowTrace_tr
ShadowTrace_105	ShadowTrace_tr
ShadowTrace_107	ShadowTrace_tr
ShadowTrace_109	ShadowTrace_tr
ShadowTrace_110	ShadowTrace_tr
PostprocessSignificantHit_0	PostprocessSignificantHit_ntr
PostprocessSignificantHit_9	PostprocessSignificantHit_tarr
PostprocessSignificantHit_10	PostprocessSignificantHit_arrayidx
PostprocessSignificantHit_11	PostprocessSignificantHit_tarr
PostprocessSignificantHit_12	PostprocessSignificantHit_arrayidx14
PostprocessSignificantHit_20	PostprocessSignificantHit_tarr
PostprocessSignificantHit_21	PostprocessSignificantHit_arrayidx56
PostprocessSignificantHit_26	PostprocessSignificantHit_tarr
PostprocessSignificantHit_27	PostprocessSignificantHit_arrayidx68
PostprocessSignificantHit_44	PostprocessSignificantHit_tarr
PostprocessSignificantHit_45	PostprocessSignificantHit_arrayidx139
get_wee_midpt_1	get_wee_midpt_xmx
get_wee_midpt_3	get_wee_midpt_xmx
get_wee_midpt_5	get_wee_midpt_xmx
get_wee_midpt_7	get_wee_midpt_xmx
PrintASCIIHistogram_20	PrintASCIIHistogram_histogram56
PrintASCIIHistogram_25	PrintASCIIHistogram_histogram71
get_wee_midpt_19	get_wee_midpt_xmx
get_wee_midpt_21	get_wee_midpt_xmx
get_wee_midpt_23	get_wee_midpt_xmx
get_wee_midpt_26	get_wee_midpt_dmx
get_wee_midpt_28	get_wee_midpt_mmx
get_wee_midpt_29	get_wee_midpt_arrayidx79
get_wee_midpt_34	get_wee_midpt_dmx
get_wee_midpt_35	get_wee_midpt_arrayidx91
get_wee_midpt_36	get_wee_midpt_dmx
get_wee_midpt_37	get_wee_midpt_arrayidx97
get_wee_midpt_42	get_wee_midpt_dmx
get_wee_midpt_43	get_wee_midpt_arrayidx107
get_wee_midpt_45	get_wee_midpt_dmx
get_wee_midpt_46	get_wee_midpt_arrayidx114
get_wee_midpt_47	get_wee_midpt_xmx
get_wee_midpt_49	get_wee_midpt_mmx
get_wee_midpt_50	get_wee_midpt_arrayidx125
get_wee_midpt_54	get_wee_midpt_xmx
get_wee_midpt_55	get_wee_midpt_arrayidx134
get_wee_midpt_56	get_wee_midpt_xmx
get_wee_midpt_58	get_wee_midpt_xmx
get_wee_midpt_59	get_wee_midpt_arrayidx142
get_wee_midpt_62	get_wee_midpt_xmx
get_wee_midpt_63	get_wee_midpt_arrayidx151
get_wee_midpt_64	get_wee_midpt_xmx
get_wee_midpt_66	get_wee_midpt_xmx
get_wee_midpt_67	get_wee_midpt_arrayidx158
get_wee_midpt_70	get_wee_midpt_xmx
get_wee_midpt_71	get_wee_midpt_arrayidx168
get_wee_midpt_72	get_wee_midpt_dmx
get_wee_midpt_74	get_wee_midpt_imx
get_wee_midpt_76	get_wee_midpt_mmx
get_wee_midpt_79	get_wee_midpt_imx
get_wee_midpt_81	get_wee_midpt_mmx
get_wee_midpt_82	get_wee_midpt_arrayidx199
get_wee_midpt_87	get_wee_midpt_imx
get_wee_midpt_88	get_wee_midpt_arrayidx211
get_wee_midpt_89	get_wee_midpt_imx
get_wee_midpt_90	get_wee_midpt_arrayidx216
get_wee_midpt_95	get_wee_midpt_imx
get_wee_midpt_96	get_wee_midpt_arrayidx225
get_wee_midpt_98	get_wee_midpt_imx
get_wee_midpt_99	get_wee_midpt_arrayidx232
get_wee_midpt_108	get_wee_midpt_imx
get_wee_midpt_109	get_wee_midpt_arrayidx255
get_wee_midpt_111	get_wee_midpt_imx
get_wee_midpt_113	get_wee_midpt_xmx
get_wee_midpt_114	get_wee_midpt_arrayidx265
get_wee_midpt_118	get_wee_midpt_mmx
get_wee_midpt_119	get_wee_midpt_arrayidx275
get_wee_midpt_128	get_wee_midpt_mmx
get_wee_midpt_129	get_wee_midpt_arrayidx298
get_wee_midpt_131	get_wee_midpt_mmx
get_wee_midpt_133	get_wee_midpt_mmx
get_wee_midpt_135	get_wee_midpt_mmx
get_wee_midpt_136	get_wee_midpt_arrayidx319
get_wee_midpt_141	get_wee_midpt_mmx
get_wee_midpt_142	get_wee_midpt_arrayidx332
get_wee_midpt_143	get_wee_midpt_imx
get_wee_midpt_144	get_wee_midpt_arrayidx338
get_wee_midpt_149	get_wee_midpt_mmx
get_wee_midpt_150	get_wee_midpt_arrayidx348
get_wee_midpt_152	get_wee_midpt_mmx
get_wee_midpt_153	get_wee_midpt_arrayidx355
get_wee_midpt_154	get_wee_midpt_xmx
get_wee_midpt_155	get_wee_midpt_arrayidx359
get_wee_midpt_159	get_wee_midpt_mmx
get_wee_midpt_160	get_wee_midpt_arrayidx367
get_wee_midpt_162	get_wee_midpt_mmx
get_wee_midpt_163	get_wee_midpt_arrayidx374
get_wee_midpt_164	get_wee_midpt_dmx
get_wee_midpt_165	get_wee_midpt_arrayidx380
get_wee_midpt_170	get_wee_midpt_mmx
get_wee_midpt_171	get_wee_midpt_arrayidx390
get_wee_midpt_173	get_wee_midpt_mmx
get_wee_midpt_174	get_wee_midpt_arrayidx397
get_wee_midpt_183	get_wee_midpt_mmx
get_wee_midpt_184	get_wee_midpt_arrayidx421
get_wee_midpt_186	get_wee_midpt_mmx
get_wee_midpt_188	get_wee_midpt_dmx
get_wee_midpt_191	get_wee_midpt_mmx
get_wee_midpt_192	get_wee_midpt_arrayidx441
get_wee_midpt_197	get_wee_midpt_dmx
get_wee_midpt_198	get_wee_midpt_arrayidx454
get_wee_midpt_199	get_wee_midpt_dmx
get_wee_midpt_200	get_wee_midpt_arrayidx460
get_wee_midpt_205	get_wee_midpt_dmx
get_wee_midpt_206	get_wee_midpt_arrayidx470
get_wee_midpt_208	get_wee_midpt_dmx
get_wee_midpt_209	get_wee_midpt_arrayidx477
get_wee_midpt_210	get_wee_midpt_imx
get_wee_midpt_213	get_wee_midpt_mmx
get_wee_midpt_214	get_wee_midpt_arrayidx491
get_wee_midpt_219	get_wee_midpt_imx
get_wee_midpt_220	get_wee_midpt_arrayidx503
get_wee_midpt_221	get_wee_midpt_imx
get_wee_midpt_222	get_wee_midpt_arrayidx508
get_wee_midpt_227	get_wee_midpt_imx
get_wee_midpt_228	get_wee_midpt_arrayidx517
get_wee_midpt_230	get_wee_midpt_imx
get_wee_midpt_231	get_wee_midpt_arrayidx524
get_wee_midpt_240	get_wee_midpt_imx
get_wee_midpt_241	get_wee_midpt_arrayidx548
get_wee_midpt_243	get_wee_midpt_imx
get_wee_midpt_245	get_wee_midpt_xmx
get_wee_midpt_247	get_wee_midpt_xmx
get_wee_midpt_248	get_wee_midpt_arrayidx565
get_wee_midpt_251	get_wee_midpt_xmx
get_wee_midpt_252	get_wee_midpt_arrayidx575
get_wee_midpt_253	get_wee_midpt_xmx
get_wee_midpt_256	get_wee_midpt_mmx
get_wee_midpt_257	get_wee_midpt_arrayidx591
get_wee_midpt_261	get_wee_midpt_xmx
get_wee_midpt_262	get_wee_midpt_arrayidx598
get_wee_midpt_264	get_wee_midpt_xmx
get_wee_midpt_265	get_wee_midpt_arrayidx604
get_wee_midpt_266	get_wee_midpt_xmx
get_wee_midpt_268	get_wee_midpt_xmx
get_wee_midpt_269	get_wee_midpt_arrayidx614
get_wee_midpt_272	get_wee_midpt_xmx
get_wee_midpt_273	get_wee_midpt_arrayidx624
get_wee_midpt_274	get_wee_midpt_xmx
get_wee_midpt_276	get_wee_midpt_xmx
get_wee_midpt_277	get_wee_midpt_arrayidx631
get_wee_midpt_280	get_wee_midpt_xmx
get_wee_midpt_281	get_wee_midpt_arrayidx641
get_wee_midpt_282	get_wee_midpt_xmx
get_wee_midpt_283	get_wee_midpt_arrayidx645
get_wee_midpt_286	get_wee_midpt_xmx
get_wee_midpt_287	get_wee_midpt_arrayidx652
get_wee_midpt_289	get_wee_midpt_xmx
get_wee_midpt_290	get_wee_midpt_arrayidx658
get_wee_midpt_292	get_wee_midpt_xmx
get_wee_midpt_294	get_wee_midpt_xmx
get_wee_midpt_296	get_wee_midpt_xmx
get_wee_midpt_298	get_wee_midpt_xmx
get_wee_midpt_300	get_wee_midpt_dmx
get_wee_midpt_302	get_wee_midpt_imx
get_wee_midpt_304	get_wee_midpt_mmx
get_wee_midpt_306	get_wee_midpt_dmx
get_wee_midpt_308	get_wee_midpt_imx
get_wee_midpt_310	get_wee_midpt_mmx
get_wee_midpt_312	get_wee_midpt_mmx
get_wee_midpt_314	get_wee_midpt_imx
get_wee_midpt_316	get_wee_midpt_xmx
get_wee_midpt_318	get_wee_midpt_xmx
get_wee_midpt_321	get_wee_midpt_xmx
get_wee_midpt_322	get_wee_midpt_arrayidx741
get_wee_midpt_324	get_wee_midpt_xmx
get_wee_midpt_325	get_wee_midpt_arrayidx751
get_wee_midpt_328	get_wee_midpt_xmx
get_wee_midpt_329	get_wee_midpt_arrayidx758
get_wee_midpt_330	get_wee_midpt_xmx
get_wee_midpt_331	get_wee_midpt_arrayidx765
get_wee_midpt_335	get_wee_midpt_mmx
get_wee_midpt_336	get_wee_midpt_arrayidx773
get_wee_midpt_341	get_wee_midpt_mmx
get_wee_midpt_342	get_wee_midpt_arrayidx788
get_wee_midpt_344	get_wee_midpt_xmx
get_wee_midpt_346	get_wee_midpt_xmx
get_wee_midpt_347	get_wee_midpt_arrayidx808
get_wee_midpt_350	get_wee_midpt_xmx
get_wee_midpt_351	get_wee_midpt_arrayidx818
get_wee_midpt_352	get_wee_midpt_xmx
get_wee_midpt_354	get_wee_midpt_mmx
get_wee_midpt_355	get_wee_midpt_arrayidx830
get_wee_midpt_359	get_wee_midpt_xmx
get_wee_midpt_360	get_wee_midpt_arrayidx837
get_wee_midpt_362	get_wee_midpt_xmx
get_wee_midpt_363	get_wee_midpt_arrayidx843
get_wee_midpt_364	get_wee_midpt_xmx
get_wee_midpt_366	get_wee_midpt_xmx
get_wee_midpt_367	get_wee_midpt_arrayidx853
get_wee_midpt_370	get_wee_midpt_xmx
get_wee_midpt_371	get_wee_midpt_arrayidx863
get_wee_midpt_372	get_wee_midpt_xmx
get_wee_midpt_374	get_wee_midpt_xmx
get_wee_midpt_375	get_wee_midpt_arrayidx870
get_wee_midpt_378	get_wee_midpt_xmx
get_wee_midpt_379	get_wee_midpt_arrayidx880
get_wee_midpt_380	get_wee_midpt_xmx
get_wee_midpt_381	get_wee_midpt_arrayidx884
get_wee_midpt_384	get_wee_midpt_xmx
get_wee_midpt_385	get_wee_midpt_arrayidx891
get_wee_midpt_387	get_wee_midpt_xmx
get_wee_midpt_388	get_wee_midpt_arrayidx897
get_wee_midpt_390	get_wee_midpt_xmx
get_wee_midpt_391	get_wee_midpt_arrayidx909
get_wee_midpt_393	get_wee_midpt_mmx
get_wee_midpt_394	get_wee_midpt_arrayidx913
get_wee_midpt_395	get_wee_midpt_dmx
get_wee_midpt_397	get_wee_midpt_imx
get_wee_midpt_403	get_wee_midpt_mmx
get_wee_midpt_404	get_wee_midpt_arrayidx936
get_wee_midpt_406	get_wee_midpt_mmx
get_wee_midpt_408	get_wee_midpt_xmx
get_wee_midpt_409	get_wee_midpt_arrayidx946
get_wee_midpt_413	get_wee_midpt_mmx
get_wee_midpt_414	get_wee_midpt_arrayidx957
get_wee_midpt_415	get_wee_midpt_mmx
get_wee_midpt_416	get_wee_midpt_arrayidx963
get_wee_midpt_421	get_wee_midpt_mmx
get_wee_midpt_422	get_wee_midpt_arrayidx972
get_wee_midpt_424	get_wee_midpt_mmx
get_wee_midpt_425	get_wee_midpt_arrayidx979
get_wee_midpt_426	get_wee_midpt_imx
get_wee_midpt_427	get_wee_midpt_arrayidx984
get_wee_midpt_432	get_wee_midpt_mmx
get_wee_midpt_433	get_wee_midpt_arrayidx993
get_wee_midpt_435	get_wee_midpt_mmx
get_wee_midpt_436	get_wee_midpt_arrayidx1000
get_wee_midpt_437	get_wee_midpt_dmx
get_wee_midpt_438	get_wee_midpt_arrayidx1006
get_wee_midpt_443	get_wee_midpt_mmx
get_wee_midpt_474	get_wee_midpt_dmx
get_wee_midpt_475	get_wee_midpt_arrayidx1083
get_wee_midpt_476	get_wee_midpt_imx
get_wee_midpt_478	get_wee_midpt_mmx
get_wee_midpt_479	get_wee_midpt_arrayidx1093
get_wee_midpt_484	get_wee_midpt_imx
get_wee_midpt_485	get_wee_midpt_arrayidx1105
get_wee_midpt_486	get_wee_midpt_imx
get_wee_midpt_487	get_wee_midpt_arrayidx1110
get_wee_midpt_492	get_wee_midpt_imx
get_wee_midpt_493	get_wee_midpt_arrayidx1119
get_wee_midpt_495	get_wee_midpt_imx
get_wee_midpt_496	get_wee_midpt_arrayidx1126
get_wee_midpt_501	get_wee_midpt_imx
get_wee_midpt_502	get_wee_midpt_arrayidx1142
get_wee_midpt_504	get_wee_midpt_mmx1159
get_wee_midpt_505	get_wee_midpt_arrayidx1160
get_wee_midpt_507	get_wee_midpt_mmx1164
get_wee_midpt_508	get_wee_midpt_arrayidx1165
get_wee_midpt_510	get_wee_midpt_imx1174
get_wee_midpt_511	get_wee_midpt_arrayidx1175
get_wee_midpt_513	get_wee_midpt_imx1179
get_wee_midpt_514	get_wee_midpt_arrayidx1180
get_wee_midpt_516	get_wee_midpt_xmx1191
get_wee_midpt_517	get_wee_midpt_arrayidx1192
get_wee_midpt_519	get_wee_midpt_xmx1195
get_wee_midpt_520	get_wee_midpt_arrayidx1196
get_wee_midpt_522	get_wee_midpt_xmx1204
get_wee_midpt_523	get_wee_midpt_arrayidx1205
get_wee_midpt_525	get_wee_midpt_xmx1208
get_wee_midpt_526	get_wee_midpt_arrayidx1209
PrintTransition_0	PrintTransition_arrayidx2
EmitSequence_27	EmitSequence_statetype
EmitSequence_30	EmitSequence_statetype127
EmitSequence_33	EmitSequence_statetype139
EmitConsensusSequence_0	Alphabet_type
EmitConsensusSequence_2	EmitConsensusSequence_mp
EmitConsensusSequence_5	EmitConsensusSequence_ip
EmitConsensusSequence_17	EmitConsensusSequence_mp
EmitConsensusSequence_30	EmitConsensusSequence_ip
P7Viterbi_1	P7Viterbi_xmx
P7Viterbi_4	P7Viterbi_xmx
P7Viterbi_6	P7Viterbi_xmx
P7Viterbi_8	P7Viterbi_xmx
P7Viterbi_10	P7Viterbi_xmx
P7Viterbi_13	P7Viterbi_dmx
P7Viterbi_15	P7Viterbi_imx
P7Viterbi_17	P7Viterbi_mmx
P7Viterbi_35	P7Viterbi_mmx
P7Viterbi_37	P7Viterbi_dmx
P7Viterbi_39	P7Viterbi_imx
P7Viterbi_41	P7Viterbi_mmx
P7Viterbi_43	P7Viterbi_dmx
P7Viterbi_45	P7Viterbi_imx
P7Viterbi_47	P7Viterbi_xmx
P7Viterbi_83	P7Viterbi_xmx
P7Viterbi_85	P7Viterbi_xmx
P7Viterbi_89	P7Viterbi_xmx
P7Viterbi_91	P7Viterbi_mmx
P7Viterbi_97	P7Viterbi_xmx
P7Viterbi_99	P7Viterbi_xmx
P7Viterbi_101	P7Viterbi_xmx
P7Viterbi_105	P7Viterbi_xmx
P7Viterbi_107	P7Viterbi_xmx
P7Viterbi_111	P7Viterbi_xmx
P7Viterbi_114	P7Viterbi_xmx
P7Viterbi_116	P7Viterbi_xmx
P7Viterbi_118	P7Viterbi_xmx
P7Viterbi_122	P7Viterbi_xmx
P7Viterbi_124	P7Viterbi_xmx
P7Viterbi_128	P7Viterbi_xmx
P7Viterbi_131	P7Viterbi_xmx
P7Viterbi_133	P7Viterbi_xmx
P7Viterbi_135	P7Viterbi_xmx
P7Viterbi_139	P7Viterbi_xmx
P7Viterbi_141	P7Viterbi_xmx
P7Viterbi_145	P7Viterbi_xmx
P7Viterbi_148	P7Viterbi_xmx
P7Viterbi_150	P7Viterbi_xmx
AddToHistogram_0	AddToHistogram_fit_type
AddToHistogram_8	AddToHistogram_histogram
AddToHistogram_23	AddToHistogram_histogram37
AddToHistogram_29	AddToHistogram_histogram57
PrintASCIIHistogram_0	PrintASCIIHistogram_lowscore
PrintASCIIHistogram_4	PrintASCIIHistogram_histogram
PrintASCIIHistogram_6	PrintASCIIHistogram_histogram5
PrintASCIIHistogram_11	PrintASCIIHistogram_histogram15
PrintASCIIHistogram_15	PrintASCIIHistogram_histogram34
main_70	main_hmm
main_73	main_hmm
main_74	main_hmm
main_79	main_hmm
main_120	main_hmm
main_121	main_hmm
main_123	main_hmm
main_125	main_hmm
main_127	main_lowscore
PrintASCIIHistogram_46	PrintASCIIHistogram_histogram159
PrintASCIIHistogram_48	PrintASCIIHistogram_expect
PrintASCIIHistogram_53	PrintASCIIHistogram_histogram173
PrintASCIIHistogram_55	PrintASCIIHistogram_histogram179
PrintASCIIHistogram_58	PrintASCIIHistogram_expect200
PrintASCIIHistogram_60	PrintASCIIHistogram_expect207
ExtremeValueSetHistogram_0	ExtremeValueSetHistogram_max
ExtremeValueSetHistogram_14	ExtremeValueSetHistogram_expect31
ExtremeValueSetHistogram_16	ExtremeValueSetHistogram_expect45
ExtremeValueSetHistogram_19	ExtremeValueSetHistogram_histogram
ExtremeValueSetHistogram_22	ExtremeValueSetHistogram_histogram59
ExtremeValueSetHistogram_25	ExtremeValueSetHistogram_expect65
ExtremeValueSetHistogram_28	ExtremeValueSetHistogram_expect72
ExtremeValueFitHistogram_0	ExtremeValueFitHistogram_lowscore
ExtremeValueFitHistogram_1	ExtremeValueFitHistogram_lowscore1
ExtremeValueFitHistogram_4	ExtremeValueFitHistogram_histogram
ExtremeValueFitHistogram_7	ExtremeValueFitHistogram_histogram7
ExtremeValueFitHistogram_16	ExtremeValueFitHistogram_histogram43
ExtremeValueFitHistogram_19	ExtremeValueFitHistogram_histogram51
annotate_model_8	annotate_model_rf17
annotate_model_19	annotate_model_cs57
annotate_model_30	annotate_model_ca102
annotate_model_35	annotate_model_map
annotate_model_47	annotate_model_mpri165
annotate_model_51	annotate_model_mpri185
annotate_model_55	annotate_model_mpri206
annotate_model_67	annotate_model_ipri257
annotate_model_71	annotate_model_ipri278
annotate_model_75	annotate_model_ipri299
annotate_model_87	annotate_model_tpri350
annotate_model_91	annotate_model_tpri371
annotate_model_95	annotate_model_tpri392
fake_tracebacks_2	fake_tracebacks_arrayidx3
fake_tracebacks_4	fake_tracebacks_arrayidx6
fake_tracebacks_6	fake_tracebacks_arrayidx9
fake_tracebacks_8	fake_tracebacks_arrayidx12
fake_tracebacks_10	fake_tracebacks_arrayidx16
fake_tracebacks_12	fake_tracebacks_arrayidx20
fake_tracebacks_14	fake_tracebacks_arrayidx29
fake_tracebacks_17	fake_tracebacks_arrayidx37
fake_tracebacks_19	fake_tracebacks_arrayidx42
fake_tracebacks_21	fake_tracebacks_arrayidx47
fake_tracebacks_34	fake_tracebacks_arrayidx97
fake_tracebacks_36	fake_tracebacks_arrayidx102
fake_tracebacks_37	fake_tracebacks_nodeidx103
fake_tracebacks_38	fake_tracebacks_arrayidx107
fake_tracebacks_39	fake_tracebacks_pos108
fake_tracebacks_41	fake_tracebacks_arrayidx121
fake_tracebacks_42	fake_tracebacks_statetype122
fake_tracebacks_44	fake_tracebacks_arrayidx130
fake_tracebacks_46	fake_tracebacks_arrayidx135
fake_tracebacks_47	fake_tracebacks_nodeidx136
fake_tracebacks_48	fake_tracebacks_arrayidx140
fake_tracebacks_61	fake_tracebacks_arrayidx194
fake_tracebacks_63	fake_tracebacks_arrayidx199
fake_tracebacks_65	fake_tracebacks_arrayidx204
fake_tracebacks_66	fake_tracebacks_pos205
fake_tracebacks_78	fake_tracebacks_arrayidx258
fake_tracebacks_80	fake_tracebacks_arrayidx263
fake_tracebacks_82	fake_tracebacks_arrayidx268
fake_tracebacks_83	fake_tracebacks_pos269
fake_tracebacks_94	fake_tracebacks_arrayidx316
fake_tracebacks_96	fake_tracebacks_arrayidx321
fake_tracebacks_97	fake_tracebacks_nodeidx322
fake_tracebacks_98	fake_tracebacks_arrayidx326
fake_tracebacks_99	fake_tracebacks_pos327
fake_tracebacks_101	fake_tracebacks_arrayidx345
fake_tracebacks_102	fake_tracebacks_statetype346
fake_tracebacks_104	fake_tracebacks_arrayidx353
fake_tracebacks_106	fake_tracebacks_arrayidx358
fake_tracebacks_108	fake_tracebacks_arrayidx363
fake_tracebacks_110	fake_tracebacks_arrayidx369
fake_tracebacks_112	fake_tracebacks_arrayidx374
fake_tracebacks_114	fake_tracebacks_arrayidx379
fake_tracebacks_116	fake_tracebacks_arrayidx392
fake_tracebacks_118	fake_tracebacks_arrayidx397
fake_tracebacks_120	fake_tracebacks_arrayidx402
fake_tracebacks_121	fake_tracebacks_arrayidx404
trace_doctor_1	trace_doctor_statetype
trace_doctor_3	trace_doctor_statetype4
trace_doctor_6	trace_doctor_nodeidx
trace_doctor_8	trace_doctor_nodeidx15
trace_doctor_9	trace_doctor_pos
trace_doctor_11	trace_doctor_pos21
trace_doctor_12	trace_doctor_statetype26
trace_doctor_14	trace_doctor_statetype34
trace_doctor_17	trace_doctor_nodeidx45
trace_doctor_19	trace_doctor_nodeidx48
trace_doctor_20	trace_doctor_pos51
trace_doctor_22	trace_doctor_pos54
trace_doctor_23	trace_doctor_statetype61
trace_doctor_25	trace_doctor_statetype68
trace_doctor_28	trace_doctor_nodeidx78
trace_doctor_30	trace_doctor_nodeidx81
trace_doctor_31	trace_doctor_pos84
trace_doctor_33	trace_doctor_pos87
trace_doctor_34	trace_doctor_statetype93
trace_doctor_36	trace_doctor_statetype101
trace_doctor_39	trace_doctor_nodeidx111
trace_doctor_41	trace_doctor_nodeidx115
trace_doctor_42	trace_doctor_pos118
trace_doctor_44	trace_doctor_pos121
trace_doctor_45	trace_doctor_statetype127
trace_doctor_47	trace_doctor_statetype135
trace_doctor_49	trace_doctor_statetype143
trace_doctor_51	trace_doctor_pos151
trace_doctor_55	trace_doctor_pos164
trace_doctor_57	trace_doctor_pos167
trace_doctor_61	trace_doctor_statetype185
trace_doctor_63	trace_doctor_statetype193
trace_doctor_65	trace_doctor_statetype201
trace_doctor_67	trace_doctor_statetype209
trace_doctor_71	trace_doctor_pos223
trace_doctor_73	trace_doctor_pos226
trace_doctor_80	trace_doctor_statetype256
trace_doctor_82	trace_doctor_statetype259
trace_doctor_83	trace_doctor_nodeidx262
trace_doctor_85	trace_doctor_nodeidx265
trace_doctor_86	trace_doctor_pos268
trace_doctor_88	trace_doctor_pos271
AllocPlan7Body_13	AllocPlan7Body_t28
AllocPlan7Body_16	AllocPlan7Body_mat34
AllocPlan7Body_19	AllocPlan7Body_ins40
AllocPlan7Body_33	AllocPlan7Body_tsc59
AllocPlan7Body_35	AllocPlan7Body_msc62
AllocPlan7Body_37	AllocPlan7Body_isc65
AllocPlan7Body_38	AllocPlan7Body_mat68
AllocPlan7Body_40	AllocPlan7Body_mat71
AllocPlan7Body_41	AllocPlan7Body_ins75
AllocPlan7Body_43	AllocPlan7Body_ins81
AllocPlan7Body_44	AllocPlan7Body_t83
AllocPlan7Body_46	AllocPlan7Body_t89
AllocPlan7Body_47	AllocPlan7Body_msc95
AllocPlan7Body_49	AllocPlan7Body_msc102
AllocPlan7Body_50	AllocPlan7Body_isc104
AllocPlan7Body_52	AllocPlan7Body_isc110
AllocPlan7Body_53	AllocPlan7Body_tsc119
AllocPlan7Body_55	AllocPlan7Body_tsc125
AllocPlan7Body_56	AllocPlan7Body_tsc135
HMMFileOpen_6	HMMFileOpen_dir
HMMFileClose_3	HMMFileClose_ssi4
HMMFileRead_0	HMMFileRead_is_seekable
P7FillOptimalAccuracy_96	P7FillOptimalAccuracy_arrayidx280
P7FillOptimalAccuracy_98	P7FillOptimalAccuracy_arrayidx285
P7FillOptimalAccuracy_99	P7FillOptimalAccuracy_arrayidx289
P7FillOptimalAccuracy_101	P7FillOptimalAccuracy_arrayidx292
P7FillOptimalAccuracy_103	P7FillOptimalAccuracy_arrayidx297
P7FillOptimalAccuracy_105	P7FillOptimalAccuracy_arrayidx305
P7FillOptimalAccuracy_107	P7FillOptimalAccuracy_xmx308
P7FillOptimalAccuracy_108	P7FillOptimalAccuracy_arrayidx309
P7FillOptimalAccuracy_110	P7FillOptimalAccuracy_arrayidx315
P7FillOptimalAccuracy_111	P7FillOptimalAccuracy_arrayidx319
P7FillOptimalAccuracy_113	P7FillOptimalAccuracy_arrayidx322
P7FillOptimalAccuracy_115	P7FillOptimalAccuracy_arrayidx327
P7FillOptimalAccuracy_116	P7FillOptimalAccuracy_arrayidx334
P7OptimalAccuracyTrace_4	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_6	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_8	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_10	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_12	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_14	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_16	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_17	P7OptimalAccuracyTrace_statetype13
P7OptimalAccuracyTrace_19	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_20	P7OptimalAccuracyTrace_statetype18
P7OptimalAccuracyTrace_29	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_31	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_32	P7OptimalAccuracyTrace_nodeidx49
P7OptimalAccuracyTrace_33	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_34	P7OptimalAccuracyTrace_pos53
P7OptimalAccuracyTrace_40	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_42	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_43	P7OptimalAccuracyTrace_nodeidx80
P7OptimalAccuracyTrace_44	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_45	P7OptimalAccuracyTrace_pos84
P7OptimalAccuracyTrace_51	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_53	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_54	P7OptimalAccuracyTrace_nodeidx113
P7OptimalAccuracyTrace_55	P7OptimalAccuracyTrace_tr
read_bin20hmm_53	read_bin20hmm_map123
read_bin20hmm_119	read_bin20hmm_mat
read_bin20hmm_125	read_bin20hmm_ins
read_bin20hmm_131	read_bin20hmm_t
read_bin20hmm_142	read_bin20hmm_mat378
read_bin20hmm_143	read_bin20hmm_arrayidx379
read_bin20hmm_147	read_bin20hmm_ins394
read_bin20hmm_148	read_bin20hmm_arrayidx395
read_bin20hmm_150	read_bin20hmm_begin402
read_bin20hmm_152	read_bin20hmm_end405
read_bin20hmm_155	read_bin20hmm_t417
read_bin20hmm_156	read_bin20hmm_arrayidx418
read_bin19hmm_6	read_bin19hmm_hmm
read_bin19hmm_7	read_bin19hmm_hmm
read_bin17hmm_6	read_bin17hmm_hmm
read_bin17hmm_7	read_bin17hmm_hmm
read_bin11hmm_6	read_bin11hmm_hmm
read_bin11hmm_7	read_bin11hmm_hmm
read_bin10hmm_6	read_bin10hmm_hmm
read_bin10hmm_7	read_bin10hmm_hmm
read_asc20hmm_27	read_asc20hmm_comlog137
read_asc20hmm_83	read_asc20hmm_mat
read_asc20hmm_84	read_asc20hmm_arrayidx473
read_asc20hmm_87	read_asc20hmm_map
read_asc20hmm_92	read_asc20hmm_rf
read_asc20hmm_97	read_asc20hmm_ins
read_asc20hmm_98	read_asc20hmm_arrayidx529
read_asc20hmm_103	read_asc20hmm_cs
read_asc20hmm_106	read_asc20hmm_t
read_asc20hmm_107	read_asc20hmm_arrayidx571
read_asc20hmm_108	read_asc20hmm_begin
read_asc20hmm_110	read_asc20hmm_end
read_asc19hmm_21	read_asc19hmm_begin
read_asc19hmm_22	read_asc19hmm_begin142
read_asc19hmm_24	read_asc19hmm_begin144
read_asc19hmm_27	read_asc19hmm_begin147
read_asc19hmm_29	read_asc19hmm_begin150
read_asc19hmm_35	read_asc19hmm_mat
read_asc19hmm_36	read_asc19hmm_arrayidx203
read_asc19hmm_38	read_asc19hmm_t
read_asc19hmm_39	read_asc19hmm_arrayidx219
read_asc19hmm_42	read_asc19hmm_t239
read_asc19hmm_43	read_asc19hmm_arrayidx240
read_asc19hmm_45	read_asc19hmm_t254
read_asc19hmm_46	read_asc19hmm_arrayidx255
read_asc19hmm_48	read_asc19hmm_t269
read_asc19hmm_49	read_asc19hmm_arrayidx270
read_asc19hmm_52	read_asc19hmm_t293
read_asc19hmm_53	read_asc19hmm_arrayidx294
read_asc19hmm_55	read_asc19hmm_t313
read_asc19hmm_56	read_asc19hmm_arrayidx314
read_asc19hmm_58	read_asc19hmm_t333
read_asc19hmm_59	read_asc19hmm_arrayidx334
read_asc19hmm_62	read_asc19hmm_rf
read_asc19hmm_65	read_asc19hmm_cs
read_asc19hmm_70	read_asc19hmm_ins
read_asc19hmm_71	read_asc19hmm_arrayidx394
read_asc17hmm_4	read_asc17hmm_hmm
read_asc17hmm_5	read_asc17hmm_hmm
read_asc17hmm_6	read_asc17hmm_hmm
read_plan9_binhmm_18	read_plan9_binhmm_name
read_plan9_binhmm_54	read_plan9_binhmm_mat169
read_plan9_binhmm_56	read_plan9_binhmm_mat174
read_plan9_binhmm_58	read_plan9_binhmm_mat179
read_plan9_binhmm_61	read_plan9_binhmm_mat189
read_plan9_binhmm_70	read_plan9_binhmm_del234
read_plan9_binhmm_72	read_plan9_binhmm_del239
read_plan9_binhmm_74	read_plan9_binhmm_del244
read_plan9_binhmm_85	read_plan9_binhmm_ins293
read_plan9_binhmm_87	read_plan9_binhmm_ins298
read_plan9_binhmm_89	read_plan9_binhmm_ins303
read_plan9_binhmm_92	read_plan9_binhmm_ins313
read_plan9_aschmm_36	read_plan9_aschmm_ref
read_plan9_aschmm_41	read_plan9_aschmm_cs
read_plan9_aschmm_43	read_plan9_aschmm_mat
read_plan9_aschmm_45	read_plan9_aschmm_mat241
read_plan9_aschmm_47	read_plan9_aschmm_mat260
read_plan9_aschmm_50	read_plan9_aschmm_mat284
read_plan9_aschmm_54	read_plan9_aschmm_ins
read_plan9_aschmm_56	read_plan9_aschmm_ins346
read_plan9_aschmm_58	read_plan9_aschmm_ins365
read_plan9_aschmm_61	read_plan9_aschmm_ins389
read_plan9_aschmm_65	read_plan9_aschmm_del
read_plan9_aschmm_67	read_plan9_aschmm_del452
read_plan9_aschmm_69	read_plan9_aschmm_del471
hmmcalibrate_66	hmmcalibrate_hmm
hmmcalibrate_80	hmmcalibrate_hmm
hmmcalibrate_92	hmmcalibrate_hmm
hmmcalibrate_98	hmmcalibrate_hmm
hmmcalibrate_105	hmmcalibrate_hmm
hmmcalibrate_107	hmmcalibrate_hmm
hmmcalibrate_108	hmmcalibrate_hmm
hmmcalibrate_110	hmmcalibrate_hmm
hmmcalibrate_112	hmmcalibrate_hmm
hmmcalibrate_113	hmmcalibrate_hmm
regc_1	regc_regcode1
reg_0	reg_regnpar
reg_8	reg_regparse
reg_15	reg_regparse36
reg_18	reg_regparse45
reg_20	reg_regparse50
main_131	main_hmm
main_133	main_hmm
main_136	main_hmm
main_138	main_hmm
main_141	main_hmm
main_145	main_hmm
main_148	main_hmm
main_151	main_hmm
main_154	main_hmm
main_157	main_hmm
main_181	main_ali
main_186	main_hmm
main_loop_serial313_3	main_loop_serial313_seq
main_loop_serial313_11	main_loop_serial313_tr
main_loop_serial313_21	main_loop_serial313_tr
TraceScoreCorrection_0	Alphabet_size
TraceScoreCorrection_2	TraceScoreCorrection_statetype
TraceScoreCorrection_4	TraceScoreCorrection_nodeidx
TraceScoreCorrection_9	TraceScoreCorrection_statetype11
TraceScoreCorrection_11	TraceScoreCorrection_nodeidx19
TraceScoreCorrection_23	TraceScoreCorrection_statetype58
TraceScoreCorrection_25	TraceScoreCorrection_statetype64
TraceScoreCorrection_27	TraceScoreCorrection_pos
Getword_0	Getword.sptr
Getword_10	Getword.sptr
Getword_13	Getword.sptr
Getword_16	Getword.sptr
P7Maxmodelmaker_19	P7Maxmodelmaker_arrayidx27
P7Maxmodelmaker_20	Alphabet_size
P7Maxmodelmaker_38	P7Maxmodelmaker_arrayidx82
P7Maxmodelmaker_89	P7Maxmodelmaker_arrayidx329
P7Maxmodelmaker_97	Alphabet_size
P7Maxmodelmaker_119	P7Maxmodelmaker_arrayidx521
P7Maxmodelmaker_138	P7Maxmodelmaker_arrayidx589
matassign2hmm_19	matassign2hmm_tr
matassign2hmm_20	matassign2hmm_arrayidx55
matassign2hmm_32	matassign2hmm_tr
matassign2hmm_33	matassign2hmm_arrayidx96
build_cij_0	build_cij_arrayidx
P7OptimalAccuracyTrace_73	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_75	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_76	P7OptimalAccuracyTrace_nodeidx170
P7OptimalAccuracyTrace_77	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_78	P7OptimalAccuracyTrace_pos174
P7OptimalAccuracyTrace_83	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_85	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_86	P7OptimalAccuracyTrace_nodeidx197
P7OptimalAccuracyTrace_87	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_97	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_99	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_100	P7OptimalAccuracyTrace_nodeidx236
P7OptimalAccuracyTrace_101	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_102	P7OptimalAccuracyTrace_pos240
P7OptimalAccuracyTrace_108	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_110	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_111	P7OptimalAccuracyTrace_nodeidx267
P7OptimalAccuracyTrace_112	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_113	P7OptimalAccuracyTrace_pos271
P7OptimalAccuracyTrace_117	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_119	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_121	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_130	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_132	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_134	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_136	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_137	P7OptimalAccuracyTrace_pos330
P7OptimalAccuracyTrace_143	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_145	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_147	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_153	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_155	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_157	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_164	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_166	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_167	P7OptimalAccuracyTrace_nodeidx397
P7OptimalAccuracyTrace_168	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_169	P7OptimalAccuracyTrace_pos401
P7OptimalAccuracyTrace_178	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_180	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_182	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_184	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_185	P7OptimalAccuracyTrace_pos440
P7OptimalAccuracyTrace_190	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_192	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_194	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_204	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_206	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_208	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_210	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_211	P7OptimalAccuracyTrace_pos495
P7OptimalAccuracyTrace_216	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_218	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_220	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_224	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_225	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_226	P7OptimalAccuracyTrace_tr
P7LaplacePrior_0	Alphabet_size
P7LaplacePrior_1	Alphabet_size
P7DefaultPrior_0	Alphabet_type
PAMPrior_0	Alphabet_type
PAMPrior_18	PAMPrior_arrayidx34
FreePlan7_50	FreePlan7_mat76
FreePlan7_54	FreePlan7_ins80
FreePlan7_58	FreePlan7_t85
ZeroPlan7_0	ZeroPlan7_M
ZeroPlan7_1	ZeroPlan7_t
ZeroPlan7_2	ZeroPlan7_arrayidx
ZeroPlan7_3	ZeroPlan7_mat
ZeroPlan7_4	ZeroPlan7_arrayidx2
ZeroPlan7_5	Alphabet_size
ZeroPlan7_6	ZeroPlan7_ins
ZeroPlan7_7	ZeroPlan7_arrayidx4
ZeroPlan7_8	Alphabet_size
ZeroPlan7_10	ZeroPlan7_mat7
ZeroPlan7_11	ZeroPlan7_arrayidx8
ZeroPlan7_12	Alphabet_size
ZeroPlan7_13	ZeroPlan7_begin
ZeroPlan7_14	ZeroPlan7_M9
ZeroPlan7_15	ZeroPlan7_end
ZeroPlan7_16	ZeroPlan7_M11
Plan7SetName_0	Plan7SetName_name1
Plan7SetName_2	Plan7SetName_name4
Plan7SetAccession_0	Plan7SetAccession_acc1
Plan7SetAccession_2	Plan7SetAccession_acc4
Plan7SetDescription_0	Plan7SetDescription_desc1
Plan7SetDescription_2	Plan7SetDescription_desc4
Plan7SetCtime_0	Plan7SetCtime_ctime
Plan7SetCtime_2	Plan7SetCtime_ctime5
Plan7Renormalize_0	Plan7Renormalize_M
Plan7Renormalize_1	Plan7Renormalize_mat
Plan7Renormalize_2	Plan7Renormalize_arrayidx
Plan7Renormalize_5	Plan7Renormalize_ins
Plan7Renormalize_6	Plan7Renormalize_arrayidx6
Plan7Renormalize_8	Plan7Renormalize_begin
Plan7Renormalize_11	Plan7Renormalize_begin11
Plan7Renormalize_15	Plan7Renormalize_t
Plan7Renormalize_16	Plan7Renormalize_arrayidx23
Plan7Renormalize_17	Plan7Renormalize_end
Plan7Renormalize_19	Plan7Renormalize_t29
Plan7Renormalize_20	Plan7Renormalize_arrayidx30
Plan7Renormalize_21	Plan7Renormalize_end35
Plan7Renormalize_23	Plan7Renormalize_t39
Plan7Renormalize_24	Plan7Renormalize_arrayidx40
Plan7Renormalize_25	Plan7Renormalize_t43
Plan7Renormalize_26	Plan7Renormalize_arrayidx44
Plan7Renormalize_28	Plan7Renormalize_t59
Plan7Renormalize_30	Plan7Renormalize_t62
Plan7LSConfig_0	Plan7LSConfig_p1
Plan7LSConfig_6	Plan7LSConfig_begin
Plan7LSConfig_9	Plan7LSConfig_begin39
Plan7LSConfig_10	Plan7LSConfig_end
Plan9toPlan7_0	Plan9toPlan7_M
Plan9toPlan7_2	Plan9toPlan7_mat
Plan9toPlan7_4	Plan9toPlan7_t4
Plan9toPlan7_5	Plan9toPlan7_arrayidx5
Plan9toPlan7_6	Plan9toPlan7_mat8
Plan9toPlan7_8	Plan9toPlan7_t13
Plan9toPlan7_9	Plan9toPlan7_arrayidx14
Plan9toPlan7_10	Plan9toPlan7_mat17
Plan9toPlan7_12	Plan9toPlan7_t22
Plan9toPlan7_13	Plan9toPlan7_arrayidx23
Plan9toPlan7_14	Plan9toPlan7_del
Plan9toPlan7_16	Plan9toPlan7_t30
Plan9toPlan7_17	Plan9toPlan7_arrayidx31
Plan9toPlan7_18	Plan9toPlan7_del34
Plan9toPlan7_20	Plan9toPlan7_t39
Plan9toPlan7_21	Plan9toPlan7_arrayidx40
Plan9toPlan7_22	Plan9toPlan7_ins
Plan9toPlan7_24	Plan9toPlan7_t47
Plan9toPlan7_25	Plan9toPlan7_arrayidx48
Plan9toPlan7_26	Plan9toPlan7_ins51
Plan9toPlan7_28	Plan9toPlan7_t56
Plan9toPlan7_29	Plan9toPlan7_arrayidx57
Plan9toPlan7_32	Plan9toPlan7_mat68
Plan9toPlan7_34	Plan9toPlan7_mat73
Plan9toPlan7_35	Plan9toPlan7_arrayidx74
Plan9toPlan7_38	Plan9toPlan7_ins91
Plan9toPlan7_40	Plan9toPlan7_ins97
Plan9toPlan7_41	Plan9toPlan7_arrayidx98
Plan9toPlan7_42	Plan9toPlan7_mat106
Plan9toPlan7_44	Plan9toPlan7_mat110
Plan9toPlan7_46	Plan9toPlan7_mat114
Plan9toPlan7_51	Plan9toPlan7_name131
P9Renormalize_0	P9Renormalize_M
P9Renormalize_1	P9Renormalize_mat
P9Renormalize_2	P9Renormalize_ins
P9Renormalize_3	P9Renormalize_del
P9Renormalize_4	P9Renormalize_mat13
P9Renormalize_6	P9Renormalize_ins18
P9DefaultNullModel_0	Alphabet_type
P7Backward_2	P7Backward_xmx
P7Backward_3	P7Backward_arrayidx2
P7Backward_4	P7Backward_xmx
P7Backward_5	P7Backward_arrayidx5
P7Backward_8	P7Backward_xmx
P7Backward_9	P7Backward_arrayidx12
P7Backward_10	P7Backward_xmx
P7Backward_12	P7Backward_xmx
P7Backward_14	P7Backward_xmx
P7Backward_17	P7Backward_xmx
P7Backward_18	P7Backward_arrayidx25
P7Backward_22	P7Backward_mmx
P7Backward_23	P7Backward_arrayidx32
P7Backward_28	P7Backward_mmx
P7Backward_29	P7Backward_arrayidx42
P7Backward_31	P7Backward_dmx
P7Backward_33	P7Backward_imx
P7Backward_41	P7Backward_xmx
P7Backward_42	P7Backward_arrayidx70
P7Backward_45	P7Backward_xmx
P7Backward_46	P7Backward_arrayidx77
P7Backward_47	P7Backward_xmx
P7Backward_49	P7Backward_xmx
P7Backward_50	P7Backward_arrayidx83
P7Backward_53	P7Backward_mmx
P7Backward_54	P7Backward_arrayidx89
P7Backward_59	P7Backward_xmx
P7Backward_60	P7Backward_arrayidx98
P7Backward_62	P7Backward_xmx
P7Backward_63	P7Backward_arrayidx107
P7Backward_65	P7Backward_mmx
P7Backward_66	P7Backward_arrayidx112
P7Backward_70	P7Backward_xmx
P7Backward_71	P7Backward_arrayidx120
P7Backward_73	P7Backward_xmx
P7Backward_74	P7Backward_arrayidx134
P7Backward_77	P7Backward_xmx
P7Backward_78	P7Backward_arrayidx142
P7Backward_79	P7Backward_xmx
P7Backward_80	P7Backward_arrayidx145
P7Backward_83	P7Backward_xmx
P7Backward_84	P7Backward_arrayidx152
P7Backward_87	P7Backward_xmx
P7Backward_88	P7Backward_arrayidx160
P7Backward_89	P7Backward_xmx
P7Backward_90	P7Backward_arrayidx163
P7Backward_93	P7Backward_xmx
P7Backward_94	P7Backward_arrayidx171
P7Backward_97	P7Backward_xmx
P7Backward_98	P7Backward_arrayidx179
P7Backward_99	P7Backward_xmx
P7Backward_100	P7Backward_arrayidx184
P7Backward_111	P7Backward_mmx
P7Backward_112	P7Backward_arrayidx204
P7Backward_114	P7Backward_dmx
P7Backward_117	P7Backward_xmx
P7Backward_118	P7Backward_arrayidx218
P7Backward_122	P7Backward_mmx
P7Backward_123	P7Backward_arrayidx228
P7Backward_128	P7Backward_imx
P7Backward_129	P7Backward_arrayidx239
P7Backward_134	P7Backward_dmx
P7Backward_135	P7Backward_arrayidx249
P7Backward_140	P7Backward_mmx
P7Backward_141	P7Backward_arrayidx260
P7Backward_146	P7Backward_mmx
P7Backward_147	P7Backward_arrayidx272
P7Backward_149	P7Backward_imx
P7Backward_150	P7Backward_arrayidx278
P7Backward_155	P7Backward_mmx
P7Backward_156	P7Backward_arrayidx289
P7Backward_161	P7Backward_imx
P7Backward_162	P7Backward_arrayidx299
P7Backward_167	P7Backward_imx
P7Backward_168	P7Backward_arrayidx310
P7Backward_170	P7Backward_dmx
P7Backward_171	P7Backward_arrayidx316
P7Backward_176	P7Backward_mmx
P7Backward_177	P7Backward_arrayidx327
P7Backward_182	P7Backward_dmx
P7Backward_183	P7Backward_arrayidx337
P7Backward_184	P7Backward_xmx
P7Backward_185	P7Backward_arrayidx345
P7EmitterPosterior_0	P7EmitterPosterior_xmx
P7EmitterPosterior_1	P7EmitterPosterior_arrayidx
P7EmitterPosterior_3	P7EmitterPosterior_xmx2
P7EmitterPosterior_4	P7EmitterPosterior_arrayidx3
P7EmitterPosterior_7	P7EmitterPosterior_xmx8
P7EmitterPosterior_8	P7EmitterPosterior_arrayidx9
P7EmitterPosterior_10	P7EmitterPosterior_xmx14
P7EmitterPosterior_11	P7EmitterPosterior_arrayidx15
P7EmitterPosterior_12	P7EmitterPosterior_xmx19
P7EmitterPosterior_13	P7EmitterPosterior_arrayidx20
P7EmitterPosterior_16	P7EmitterPosterior_xmx27
P7EmitterPosterior_17	P7EmitterPosterior_arrayidx28
P7EmitterPosterior_19	P7EmitterPosterior_xmx33
P7EmitterPosterior_20	P7EmitterPosterior_arrayidx34
P7EmitterPosterior_21	P7EmitterPosterior_xmx38
P7EmitterPosterior_22	P7EmitterPosterior_arrayidx39
P7EmitterPosterior_25	P7EmitterPosterior_xmx46
P7EmitterPosterior_26	P7EmitterPosterior_arrayidx47
P7EmitterPosterior_28	P7EmitterPosterior_xmx52
P7EmitterPosterior_29	P7EmitterPosterior_arrayidx53
P7EmitterPosterior_30	P7EmitterPosterior_xmx56
P7EmitterPosterior_32	P7EmitterPosterior_xmx60
P7EmitterPosterior_35	P7EmitterPosterior_mmx
P7EmitterPosterior_36	P7EmitterPosterior_arrayidx68
P7EmitterPosterior_38	P7EmitterPosterior_mmx72
P7EmitterPosterior_39	P7EmitterPosterior_arrayidx73
P7EmitterPosterior_40	P7EmitterPosterior_mmx79
P7EmitterPosterior_41	P7EmitterPosterior_arrayidx80
P7EmitterPosterior_46	P7EmitterPosterior_imx
P7EmitterPosterior_47	P7EmitterPosterior_arrayidx91
P7EmitterPosterior_52	P7EmitterPosterior_xmx101
P7EmitterPosterior_53	P7EmitterPosterior_arrayidx102
P7EmitterPosterior_57	P7EmitterPosterior_dmx
P7EmitterPosterior_58	P7EmitterPosterior_arrayidx111
P7EmitterPosterior_63	P7EmitterPosterior_mmx123
P7EmitterPosterior_64	P7EmitterPosterior_arrayidx124
P7EmitterPosterior_66	P7EmitterPosterior_mmx129
P7EmitterPosterior_67	P7EmitterPosterior_arrayidx130
P7EmitterPosterior_69	P7EmitterPosterior_imx135
P7EmitterPosterior_70	P7EmitterPosterior_arrayidx136
P7EmitterPosterior_72	P7EmitterPosterior_imx140
P7EmitterPosterior_73	P7EmitterPosterior_arrayidx141
P7EmitterPosterior_74	P7EmitterPosterior_mmx146
P7EmitterPosterior_75	P7EmitterPosterior_arrayidx147
P7EmitterPosterior_80	P7EmitterPosterior_imx157
P7EmitterPosterior_81	P7EmitterPosterior_arrayidx158
P7EmitterPosterior_86	P7EmitterPosterior_imx168
P7EmitterPosterior_87	P7EmitterPosterior_arrayidx169
P7EmitterPosterior_89	P7EmitterPosterior_imx174
P7EmitterPosterior_90	P7EmitterPosterior_arrayidx175
P7EmitterPosterior_92	P7EmitterPosterior_dmx180
P7EmitterPosterior_95	P7EmitterPosterior_mmx186
P7EmitterPosterior_96	P7EmitterPosterior_arrayidx187
P7EmitterPosterior_99	P7EmitterPosterior_mmx192
P7EmitterPosterior_100	P7EmitterPosterior_arrayidx193
P7EmitterPosterior_102	P7EmitterPosterior_mmx200
P7EmitterPosterior_103	P7EmitterPosterior_arrayidx201
P7EmitterPosterior_110	P7EmitterPosterior_imx215
P7EmitterPosterior_111	P7EmitterPosterior_arrayidx216
P7EmitterPosterior_117	P7EmitterPosterior_xmx228
P7EmitterPosterior_118	P7EmitterPosterior_arrayidx229
P7EmitterPosterior_124	P7EmitterPosterior_dmx241
P7EmitterPosterior_125	P7EmitterPosterior_arrayidx242
P7EmitterPosterior_132	P7EmitterPosterior_mmx256
P7EmitterPosterior_133	P7EmitterPosterior_arrayidx257
P7EmitterPosterior_136	P7EmitterPosterior_mmx263
P7EmitterPosterior_137	P7EmitterPosterior_arrayidx264
P7EmitterPosterior_139	P7EmitterPosterior_dmx268
P7EmitterPosterior_142	P7EmitterPosterior_dmx274
P7EmitterPosterior_145	P7EmitterPosterior_imx280
P7FillOptimalAccuracy_0	P7FillOptimalAccuracy_xmx1
P7FillOptimalAccuracy_1	P7FillOptimalAccuracy_mmx2
P7FillOptimalAccuracy_2	P7FillOptimalAccuracy_imx3
P7FillOptimalAccuracy_3	P7FillOptimalAccuracy_dmx4
P7FillOptimalAccuracy_16	P7FillOptimalAccuracy_arrayidx44
P7FillOptimalAccuracy_18	P7FillOptimalAccuracy_arrayidx48
P7FillOptimalAccuracy_20	P7FillOptimalAccuracy_arrayidx53
P7FillOptimalAccuracy_21	P7FillOptimalAccuracy_arrayidx59
P7FillOptimalAccuracy_23	P7FillOptimalAccuracy_arrayidx63
P7FillOptimalAccuracy_25	P7FillOptimalAccuracy_arrayidx69
P7FillOptimalAccuracy_26	P7FillOptimalAccuracy_arrayidx76
P7FillOptimalAccuracy_28	P7FillOptimalAccuracy_arrayidx80
P7FillOptimalAccuracy_30	P7FillOptimalAccuracy_arrayidx86
P7FillOptimalAccuracy_31	P7FillOptimalAccuracy_arrayidx91
P7FillOptimalAccuracy_33	P7FillOptimalAccuracy_arrayidx95
P7FillOptimalAccuracy_35	P7FillOptimalAccuracy_arrayidx101
P7FillOptimalAccuracy_36	P7FillOptimalAccuracy_arrayidx106
P7FillOptimalAccuracy_38	P7FillOptimalAccuracy_mmx110
P7FillOptimalAccuracy_39	P7FillOptimalAccuracy_arrayidx111
P7FillOptimalAccuracy_41	P7FillOptimalAccuracy_arrayidx115
P7FillOptimalAccuracy_43	P7FillOptimalAccuracy_arrayidx124
P7FillOptimalAccuracy_45	P7FillOptimalAccuracy_arrayidx128
P7FillOptimalAccuracy_47	P7FillOptimalAccuracy_arrayidx134
P7FillOptimalAccuracy_48	P7FillOptimalAccuracy_arrayidx140
P7FillOptimalAccuracy_50	P7FillOptimalAccuracy_arrayidx144
P7FillOptimalAccuracy_52	P7FillOptimalAccuracy_arrayidx150
P7FillOptimalAccuracy_54	P7FillOptimalAccuracy_arrayidx160
P7FillOptimalAccuracy_56	P7FillOptimalAccuracy_arrayidx164
P7FillOptimalAccuracy_58	P7FillOptimalAccuracy_arrayidx170
P7FillOptimalAccuracy_59	P7FillOptimalAccuracy_arrayidx176
P7FillOptimalAccuracy_61	P7FillOptimalAccuracy_arrayidx180
P7FillOptimalAccuracy_63	P7FillOptimalAccuracy_arrayidx186
P7FillOptimalAccuracy_64	P7FillOptimalAccuracy_arrayidx191
P7FillOptimalAccuracy_66	P7FillOptimalAccuracy_imx195
P7FillOptimalAccuracy_67	P7FillOptimalAccuracy_arrayidx196
P7FillOptimalAccuracy_69	P7FillOptimalAccuracy_arrayidx201
P7FillOptimalAccuracy_71	P7FillOptimalAccuracy_arrayidx211
P7FillOptimalAccuracy_73	P7FillOptimalAccuracy_xmx214
P7FillOptimalAccuracy_74	P7FillOptimalAccuracy_arrayidx215
P7FillOptimalAccuracy_76	P7FillOptimalAccuracy_arrayidx221
P7FillOptimalAccuracy_78	P7FillOptimalAccuracy_arrayidx232
P7FillOptimalAccuracy_80	P7FillOptimalAccuracy_arrayidx235
P7FillOptimalAccuracy_82	P7FillOptimalAccuracy_arrayidx240
P7FillOptimalAccuracy_84	P7FillOptimalAccuracy_arrayidx251
P7FillOptimalAccuracy_86	P7FillOptimalAccuracy_xmx254
P7FillOptimalAccuracy_87	P7FillOptimalAccuracy_arrayidx255
P7FillOptimalAccuracy_89	P7FillOptimalAccuracy_arrayidx261
P7FillOptimalAccuracy_90	P7FillOptimalAccuracy_arrayidx265
P7FillOptimalAccuracy_92	P7FillOptimalAccuracy_arrayidx268
P7FillOptimalAccuracy_94	P7FillOptimalAccuracy_arrayidx273
seqfile_open_9	seqfile_open_f23
seqfile_open_15	seqfile_open_afp36
seqfile_open_17	seqfile_open_afp39
seqfile_open_19	seqfile_open_afp42
seqfile_open_21	seqfile_open_afp45
seqfile_open_23	seqfile_open_afp48
seqfile_open_25	seqfile_open_afp51
seqfile_open_28	seqfile_open_afp57
SeqfileGetLine_0	SeqfileGetLine_ssimode
P7OptimalAccuracyTrace_62	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_64	P7OptimalAccuracyTrace_tr
P7OptimalAccuracyTrace_66	P7OptimalAccuracyTrace_tr
ReadA2M_1	ReadA2M_buf
ReadA2M_9	ReadA2M_index
ReadA2M_12	ReadA2M_sqname
ReadA2M_15	ReadA2M_aseq
ReadA2M_16	ReadA2M_sqlen
ReadA2M_19	ReadA2M_sqlen36
ComparePairAlignments_0	ComparePairAlignments_klist1
ComparePairAlignments_1	ComparePairAlignments_klist2
ComparePairAlignments_2	ComparePairAlignments_tlist1
ComparePairAlignments_3	ComparePairAlignments_tlist2
CompareRefPairAlignments_0	CompareRefPairAlignments_klist1
CompareRefPairAlignments_1	CompareRefPairAlignments_klist2
CompareRefPairAlignments_2	CompareRefPairAlignments_tlist1
CompareRefPairAlignments_3	CompareRefPairAlignments_tlist2
FreeAlignment_0	FreeAlignment_nseq
FreeAlignment_1	FreeAlignment_sqinfo
FreeAlignment_3	FreeAlignment_sqinfo2
FreeAlignment_5	FreeAlignment_sqinfo5
FreeAlignment_7	FreeAlignment_sqinfo12
default_nucleic_prior_0	Alphabet_size
default_nucleic_prior_1	Alphabet_size
FreeTophits_1	FreeTophits_unsrt
FreeTophits_3	FreeTophits_unsrt3
FreeTophits_4	FreeTophits_ali5
FreeTophits_5	FreeTophits_unsrt7
FreeTophits_7	FreeTophits_unsrt12
FreeTophits_9	FreeTophits_unsrt17
FreeTophits_11	FreeTophits_unsrt22
FreeTophits_13	FreeTophits_unsrt27
FreeTophits_15	FreeTophits_unsrt32
GetRankedHit_0	GetRankedHit_hit
GetRankedHit_1	GetRankedHit_arrayidx
GetRankedHit_3	GetRankedHit_hit4
GetRankedHit_4	GetRankedHit_arrayidx5
GetRankedHit_6	GetRankedHit_hit10
GetRankedHit_7	GetRankedHit_arrayidx11
GetRankedHit_9	GetRankedHit_hit16
GetRankedHit_10	GetRankedHit_arrayidx17
GetRankedHit_12	GetRankedHit_hit22
GetRankedHit_13	GetRankedHit_arrayidx23
GetRankedHit_15	GetRankedHit_hit28
GetRankedHit_16	GetRankedHit_arrayidx29
GetRankedHit_18	GetRankedHit_hit34
GetRankedHit_19	GetRankedHit_arrayidx35
GetRankedHit_21	GetRankedHit_hit40
GetRankedHit_22	GetRankedHit_arrayidx41
GetRankedHit_24	GetRankedHit_hit46
GetRankedHit_25	GetRankedHit_arrayidx47
GetRankedHit_27	GetRankedHit_hit52
GetRankedHit_28	GetRankedHit_arrayidx53
GetRankedHit_30	GetRankedHit_hit58
GetRankedHit_31	GetRankedHit_arrayidx59
GetRankedHit_33	GetRankedHit_hit64
GetRankedHit_34	GetRankedHit_arrayidx65
GetRankedHit_36	GetRankedHit_hit70
GetRankedHit_37	GetRankedHit_arrayidx71
GetRankedHit_39	GetRankedHit_hit76
GetRankedHit_40	GetRankedHit_arrayidx77
GetRankedHit_42	GetRankedHit_hit82
GetRankedHit_43	GetRankedHit_arrayidx83
GetRankedHit_45	GetRankedHit_hit88
GetRankedHit_46	GetRankedHit_arrayidx89
TophitsMaxName_1	TophitsMaxName_unsrt
FullSortTophits_6	FullSortTophits_hit6
P7ReallocTrace_0	P7ReallocTrace_statetype
P7ReallocTrace_2	P7ReallocTrace_nodeidx
P7ReallocTrace_6	P7ReallocTrace_pos
P7ReverseTrace_10	P7ReverseTrace_statetype12
P7ReverseTrace_12	P7ReverseTrace_nodeidx16
P7ReverseTrace_14	P7ReverseTrace_pos21
P7TraceCount_0	P7TraceCount_tlen
P7TraceCount_1	P7TraceCount_pos
P7TraceCount_3	P7TraceCount_statetype
P7TraceCount_5	P7TraceCount_nodeidx
P7TraceCount_7	P7TraceCount_mat
P7TraceCount_8	P7TraceCount_arrayidx8
P7TraceCount_10	P7TraceCount_statetype12
P7TraceCount_12	P7TraceCount_nodeidx19
P7TraceCount_14	P7TraceCount_ins
P7TraceCount_15	P7TraceCount_arrayidx22
P7TraceCount_17	P7TraceCount_statetype27
P7TraceCount_19	P7TraceCount_statetype32
P7TraceCount_23	P7TraceCount_statetype45
P7TraceCount_25	P7TraceCount_statetype49
P7TraceCount_28	P7TraceCount_statetype55
P7TraceCount_30	P7TraceCount_nodeidx61
P7TraceCount_32	P7TraceCount_begin
P7TraceCount_35	P7TraceCount_statetype70
P7TraceCount_37	P7TraceCount_statetype75
P7TraceCount_40	P7TraceCount_statetype82
P7TraceCount_42	P7TraceCount_nodeidx87
P7TraceCount_44	P7TraceCount_t
P7TraceCount_45	P7TraceCount_arrayidx90
P7TraceCount_47	P7TraceCount_nodeidx95
P7TraceCount_49	P7TraceCount_t98
P7TraceCount_50	P7TraceCount_arrayidx99
P7TraceCount_52	P7TraceCount_nodeidx104
P7TraceCount_54	P7TraceCount_t107
P7TraceCount_55	P7TraceCount_arrayidx108
P7TraceCount_57	P7TraceCount_nodeidx113
P7TraceCount_59	P7TraceCount_end
P7TraceCount_61	P7TraceCount_statetype120
P7TraceCount_63	P7TraceCount_statetype125
P7TraceCount_66	P7TraceCount_statetype132
P7TraceCount_68	P7TraceCount_nodeidx137
P7TraceCount_70	P7TraceCount_t140
P7TraceCount_71	P7TraceCount_arrayidx141
P7TraceCount_73	P7TraceCount_nodeidx146
P7TraceCount_75	P7TraceCount_t149
P7TraceCount_76	P7TraceCount_arrayidx150
P7TraceCount_78	P7TraceCount_statetype155
P7TraceCount_80	P7TraceCount_statetype160
P7TraceCount_83	P7TraceCount_statetype167
P7TraceCount_85	P7TraceCount_nodeidx172
P7TraceCount_87	P7TraceCount_t175
P7TraceCount_88	P7TraceCount_arrayidx176
P7TraceCount_90	P7TraceCount_nodeidx181
P7TraceCount_92	P7TraceCount_t184
P7TraceCount_93	P7TraceCount_arrayidx185
P7TraceCount_95	P7TraceCount_statetype191
P7TraceCount_97	P7TraceCount_statetype196
P7TraceCount_100	P7TraceCount_statetype203
P7TraceCount_104	P7TraceCount_statetype218
P7TraceCount_106	P7TraceCount_statetype223
P7TraceCount_109	P7TraceCount_statetype230
P7TraceCount_113	P7TraceCount_statetype245
P7TraceCount_115	P7TraceCount_statetype250
P7TraceCount_118	P7TraceCount_statetype257
P7TraceCount_122	P7TraceCount_statetype272
P7TraceCount_124	P7TraceCount_statetype277
P7TraceCount_127	P7TraceCount_statetype284
P7TraceScore_1	P7TraceScore_pos
P7TraceScore_4	P7TraceScore_statetype
P7TraceScore_6	P7TraceScore_nodeidx
P7TraceScore_11	P7TraceScore_statetype15
P7TraceScore_13	P7TraceScore_nodeidx22
P7TraceScore_18	P7TraceScore_statetype31
P7TraceScore_20	P7TraceScore_nodeidx34
P7TraceScore_22	P7TraceScore_statetype38
P7TraceScore_24	P7TraceScore_nodeidx42
P7Traces2Alignment_32	P7Traces2Alignment_aseq
P7Traces2Alignment_35	P7Traces2Alignment_aseq152
P7Traces2Alignment_37	P7Traces2Alignment_aseq160
P7Traces2Alignment_54	P7Traces2Alignment_aseq199
P7Traces2Alignment_55	P7Traces2Alignment_arrayidx200
P7Traces2Alignment_57	P7Traces2Alignment_aseq217
P7Traces2Alignment_62	P7Traces2Alignment_aseq233
P7Traces2Alignment_63	P7Traces2Alignment_arrayidx234
P7Traces2Alignment_64	P7Traces2Alignment_aseq250
P7Traces2Alignment_69	P7Traces2Alignment_aseq266
P7Traces2Alignment_70	P7Traces2Alignment_arrayidx267
P7Traces2Alignment_72	P7Traces2Alignment_aseq289
P7Traces2Alignment_73	P7Traces2Alignment_arrayidx290
P7Traces2Alignment_77	P7Traces2Alignment_aseq307
P7Traces2Alignment_78	P7Traces2Alignment_arrayidx308
P7Traces2Alignment_82	P7Traces2Alignment_aseq322
P7Traces2Alignment_83	P7Traces2Alignment_arrayidx323
P7Traces2Alignment_90	P7Traces2Alignment_sqname
P7Traces2Alignment_97	P7Traces2Alignment_aseq388
P7Traces2Alignment_98	P7Traces2Alignment_arrayidx389
P7Traces2Alignment_100	P7Traces2Alignment_ss394
P7Traces2Alignment_105	P7Traces2Alignment_aseq413
P7Traces2Alignment_106	P7Traces2Alignment_arrayidx414
P7Traces2Alignment_108	P7Traces2Alignment_sa419
P7Traces2Alignment_110	P7Traces2Alignment_wgt426
CreateFancyAli_0	CreateFancyAli_tlen
CreateFancyAli_25	CreateFancyAli_pos
CreateFancyAli_27	CreateFancyAli_pos57
CreateFancyAli_30	CreateFancyAli_pos66
CreateFancyAli_32	CreateFancyAli_pos72
CreateFancyAli_35	CreateFancyAli_statetype
CreateFancyAli_39	CreateFancyAli_pos93
CreateFancyAli_41	CreateFancyAli_pos99
CreateFancyAli_45	CreateFancyAli_aseq110
CreateFancyAli_49	CreateFancyAli_nodeidx
CreateFancyAli_53	CreateFancyAli_rfline131
CreateFancyAli_55	CreateFancyAli_nodeidx139
CreateFancyAli_59	CreateFancyAli_csline144
CreateFancyAli_60	CreateFancyAli_nodeidx148
CreateFancyAli_66	CreateFancyAli_model156
CreateFancyAli_67	CreateFancyAli_nodeidx160
CreateFancyAli_72	CreateFancyAli_model170
CreateFancyAli_74	CreateFancyAli_model176
CreateFancyAli_75	CreateFancyAli_pos180
CreateFancyAli_78	CreateFancyAli_pos189
CreateFancyAli_82	CreateFancyAli_mline197
CreateFancyAli_83	CreateFancyAli_nodeidx201
CreateFancyAli_88	CreateFancyAli_mline211
CreateFancyAli_90	CreateFancyAli_mline217
CreateFancyAli_91	CreateFancyAli_nodeidx222
CreateFancyAli_93	CreateFancyAli_pos226
CreateFancyAli_100	CreateFancyAli_pos243
CreateFancyAli_104	CreateFancyAli_aseq251
CreateFancyAli_106	CreateFancyAli_nodeidx259
CreateFancyAli_110	CreateFancyAli_rfline265
CreateFancyAli_112	CreateFancyAli_nodeidx273
CreateFancyAli_116	CreateFancyAli_csline279
CreateFancyAli_117	CreateFancyAli_nodeidx283
CreateFancyAli_123	CreateFancyAli_model292
CreateFancyAli_124	CreateFancyAli_nodeidx296
CreateFancyAli_129	CreateFancyAli_model306
CreateFancyAli_131	CreateFancyAli_model312
CreateFancyAli_134	CreateFancyAli_nodeidx323
CreateFancyAli_136	CreateFancyAli_pos327
CreateFancyAli_143	CreateFancyAli_pos343
CreateFancyAli_147	CreateFancyAli_aseq354
PrintFancyAli_2	PrintFancyAli_aseq
PrintFancyAli_4	PrintFancyAli_aseq10
PrintFancyAli_6	PrintFancyAli_aseq16
PrintFancyAli_8	PrintFancyAli_aseq23
PrintFancyAli_10	PrintFancyAli_aseq30
PrintFancyAli_12	PrintFancyAli_aseq37
TraceDecompose_11	TraceDecompose_arrayidx43
TraceDecompose_12	TraceDecompose_arrayidx46
TraceDecompose_14	TraceDecompose_arrayidx50
TraceDecompose_16	TraceDecompose_arrayidx53
TraceDecompose_18	TraceDecompose_arrayidx56
TraceDecompose_20	TraceDecompose_arrayidx60
TraceDecompose_22	TraceDecompose_arrayidx64
TraceDecompose_26	TraceDecompose_arrayidx72
TraceDecompose_27	TraceDecompose_statetype73
TraceDecompose_30	TraceDecompose_arrayidx80
TraceDecompose_31	TraceDecompose_nodeidx81
TraceDecompose_34	TraceDecompose_arrayidx88
TraceDecompose_35	TraceDecompose_pos89
TraceDecompose_38	TraceDecompose_arrayidx104
TraceDecompose_40	TraceDecompose_arrayidx109
TraceDecompose_42	TraceDecompose_arrayidx114
TraceDecompose_44	TraceDecompose_arrayidx120
TraceDecompose_46	TraceDecompose_arrayidx125
TraceDecompose_48	TraceDecompose_arrayidx130
TraceSimpleBounds_0	TraceSimpleBounds_tlen
TraceSimpleBounds_1	TraceSimpleBounds_statetype
TraceSimpleBounds_3	TraceSimpleBounds_statetype5
TraceSimpleBounds_5	TraceSimpleBounds_nodeidx
TraceSimpleBounds_7	TraceSimpleBounds_statetype13
TraceSimpleBounds_9	TraceSimpleBounds_pos
TraceSimpleBounds_14	TraceSimpleBounds_statetype42
TraceSimpleBounds_16	TraceSimpleBounds_statetype49
TraceSimpleBounds_18	TraceSimpleBounds_nodeidx56
TraceSimpleBounds_20	TraceSimpleBounds_statetype60
TraceSimpleBounds_22	TraceSimpleBounds_pos67
MasterTraceFromMap_0	MasterTraceFromMap_tr
MasterTraceFromMap_1	MasterTraceFromMap_tr
MasterTraceFromMap_3	MasterTraceFromMap_tr
MasterTraceFromMap_4	MasterTraceFromMap_tr
MasterTraceFromMap_6	MasterTraceFromMap_tr
MasterTraceFromMap_7	MasterTraceFromMap_tr
MasterTraceFromMap_8	MasterTraceFromMap_tr
MasterTraceFromMap_9	MasterTraceFromMap_tr
MasterTraceFromMap_10	MasterTraceFromMap_tr
ImposeMasterTrace_6	ImposeMasterTrace_arrayidx11
ImposeMasterTrace_31	ImposeMasterTrace_arrayidx75
ImposeMasterTrace_34	ImposeMasterTrace_arrayidx80
ImposeMasterTrace_57	ImposeMasterTrace_arrayidx148
ImposeMasterTrace_62	ImposeMasterTrace_arrayidx163
ImposeMasterTrace_85	ImposeMasterTrace_arrayidx230
ImposeMasterTrace_89	ImposeMasterTrace_arrayidx241
regmatch_0	regmatch_scan.0
regrepeat_0	regrepeat_node
MSAAlloc_14	MSAAlloc_aseq25
MSAExpand_2	MSAExpand_aseq
RandomAlignment_14	RandomAlignment_arrayidx88
RandomAlignment_16	RandomAlignment_arrayidx109
RandomAlignment_19	RandomAlignment_arrayidx118
RandomAlignment_25	RandomAlignment_arrayidx159
RandomAlignment_29	RandomAlignment_arrayidx172
RandomAlignment_34	RandomAlignment_arrayidx202
ReadClustal_15	ReadClustal_aseq
ReadClustal_16	ReadClustal_sqlen
ReadClustal_19	ReadClustal_sqlen41
Cluster_4	Cluster_arrayidx11
Cluster_6	Cluster_arrayidx15
Cluster_12	Cluster_arrayidx62
Cluster_14	Cluster_arrayidx69
Cluster_38	Cluster_is_in197
Cluster_40	Cluster_is_in204
Cluster_50	Cluster_is_in252
Cluster_52	Cluster_is_in259
Cluster_56	Cluster_arrayidx297
Cluster_58	Cluster_arrayidx301
Cluster_60	Cluster_arrayidx306
Cluster_61	Cluster_arrayidx310
Cluster_66	Cluster_arrayidx347
Cluster_68	Cluster_arrayidx351
Cluster_70	Cluster_arrayidx356
Cluster_71	Cluster_arrayidx360
Cluster_74	Cluster_arrayidx384
Cluster_76	Cluster_arrayidx388
Cluster_78	Cluster_arrayidx395
Cluster_79	Cluster_arrayidx400
Cluster_81	Cluster_arrayidx404
Cluster_83	Cluster_arrayidx410
Cluster_85	Cluster_arrayidx414
Cluster_87	Cluster_arrayidx418
Cluster_88	Cluster_arrayidx423
Cluster_90	Cluster_arrayidx427
Cluster_92	Cluster_arrayidx434
Cluster_94	Cluster_arrayidx439
Cluster_96	Cluster_arrayidx445
Cluster_97	Cluster_arrayidx449
Cluster_99	Cluster_arrayidx453
Cluster_101	Cluster_arrayidx461
Cluster_102	Cluster_arrayidx472
Cluster_104	Cluster_arrayidx476
MakeDiffMx_2	MakeDiffMx_arrayidx10
MakeDiffMx_3	MakeDiffMx_arrayidx14
MakeIdentityMx_2	MakeIdentityMx_arrayidx9
MakeIdentityMx_3	MakeIdentityMx_arrayidx13
ParsePAMFile_22	ParsePAMFile_arrayidx122
Getopt_0	Getopt.optind
Getopt_53	Getopt.optptr
Getopt_55	Getopt_name138
Getopt_57	Getopt.optptr
Getopt_62	Getopt.optptr
Getopt_72	Getopt.optptr
Getopt_78	Getopt_ret_optarg
Getopt_82	Getopt_ret_optarg
GKIFree_1	GKIFree_table
GKIFree_3	GKIFree_table4
GKIFree_4	GKIFree_arrayidx5
GKIFree_6	GKIFree_table7
GKIFree_7	GKIFree_arrayidx8
GKIFree_9	GKIFree_table12
GKIFree_10	GKIFree_arrayidx13
GKIFree_12	GKIFree_table17
GKIFree_15	GKIFree_table20
GKIStoreKey_0	GKIStoreKey_table
GKIStoreKey_4	GKIStoreKey_table3
GKIStoreKey_6	GKIStoreKey_table8
GKIStoreKey_7	GKIStoreKey_arrayidx9
GKIStoreKey_8	GKIStoreKey_table12
GKIStoreKey_9	GKIStoreKey_arrayidx13
GKIStoreKey_12	GKIStoreKey_table17
GKIStoreKey_13	GKIStoreKey_arrayidx18
GKIStoreKey_14	GKIStoreKey_table20
GKIStoreKey_15	GKIStoreKey_arrayidx21
GKIKeyIndex_0	GKIKeyIndex_table
GKIKeyIndex_1	GKIKeyIndex_arrayidx
GKIKeyIndex_4	GKIKeyIndex_nxt
gki_upsize_6	gki_upsize_table6
gki_upsize_8	gki_upsize_table9
gki_upsize_10	gki_upsize_table12
gki_upsize_11	gki_upsize_arrayidx13
ReadSELEX_18	ReadSELEX_sqinfo61
ReadSELEX_23	ReadSELEX_sqinfo72
ReadSELEX_31	ReadSELEX_sqinfo152
ReadSELEX_34	ReadSELEX_sqinfo163
ReadSELEX_52	ReadSELEX_sqinfo272
ReadSELEX_55	ReadSELEX_sqinfo282
ReadSELEX_56	ReadSELEX_sqinfo286
ReadSELEX_59	ReadSELEX_sqinfo297
ReadSELEX_62	ReadSELEX_wgt307
ReadSELEX_98	ReadSELEX_wgt458
ReadSELEX_101	ReadSELEX_sqinfo466
ReadSELEX_104	ReadSELEX_sqinfo475
ReadSELEX_107	ReadSELEX_sqinfo484
ReadSELEX_110	ReadSELEX_sqinfo493
ReadSELEX_113	ReadSELEX_sqinfo502
ReadSELEX_115	ReadSELEX_sqinfo510
ReadSELEX_121	ReadSELEX_cs555
ReadSELEX_126	ReadSELEX_rf575
ReadSELEX_131	ReadSELEX_sqinfo597
ReadSELEX_132	ReadSELEX_ss599
ReadSELEX_137	ReadSELEX_sqinfo621
ReadSELEX_138	ReadSELEX_sa623
ReadSELEX_143	ReadSELEX_arrayidx644
ReadSELEX_157	ReadSELEX_sqinfo741
ReadSELEX_159	ReadSELEX_arrayidx753
ReadSELEX_161	ReadSELEX_arrayidx761
ReadSELEX_163	ReadSELEX_arrayidx769
ReadSELEX_165	ReadSELEX_arrayidx777
ReadSELEX_167	ReadSELEX_arrayidx785
ReadSELEX_169	ReadSELEX_sqinfo793
ReadSELEX_170	ReadSELEX_ss795
ReadSELEX_172	ReadSELEX_sqinfo799
ReadSELEX_173	ReadSELEX_ss801
ReadSELEX_174	ReadSELEX_sqinfo810
ReadSELEX_176	ReadSELEX_sqinfo816
ReadSELEX_178	ReadSELEX_arrayidx828
ReadSELEX_180	ReadSELEX_arrayidx836
ReadSELEX_182	ReadSELEX_arrayidx844
ReadSELEX_184	ReadSELEX_arrayidx852
ReadSELEX_186	ReadSELEX_arrayidx860
ReadSELEX_188	ReadSELEX_sqinfo868
ReadSELEX_189	ReadSELEX_sa870
ReadSELEX_191	ReadSELEX_sqinfo874
ReadSELEX_192	ReadSELEX_sa876
ReadSELEX_193	ReadSELEX_sqinfo885
ReadSELEX_200	ReadSELEX_arrayidx925
ReadSELEX_207	ReadSELEX_sqinfo957
ReadSELEX_208	ReadSELEX_sqinfo960
DealignAseqs_18	DealignAseqs_arrayidx62
copy_alignment_line_0	copy_alignment_line_s2.0
MSAExpand_7	MSAExpand_sqname
MSAExpand_12	MSAExpand_sqlen
MSAExpand_17	MSAExpand_wgt
MSAExpand_23	MSAExpand_ss19
MSAExpand_28	MSAExpand_sslen
MSAExpand_34	MSAExpand_sa33
MSAExpand_39	MSAExpand_salen
MSAExpand_45	MSAExpand_sqacc48
MSAExpand_51	MSAExpand_sqdesc58
MSAExpand_66	MSAExpand_aseq94
MSAExpand_67	MSAExpand_arrayidx95
MSAExpand_70	MSAExpand_aseq102
MSAExpand_74	MSAExpand_ss120
MSAExpand_75	MSAExpand_arrayidx121
MSAExpand_78	MSAExpand_ss128
MSAExpand_82	MSAExpand_ss148
MSAExpand_83	MSAExpand_arrayidx149
MSAExpand_86	MSAExpand_sa156
MSAExpand_91	MSAExpand_gs175
MSAExpand_93	MSAExpand_gs181
MSAExpand_94	MSAExpand_arrayidx182
MSAExpand_99	MSAExpand_gs188
MSAExpand_103	MSAExpand_gs200
MSAExpand_107	MSAExpand_gr219
MSAExpand_109	MSAExpand_gr225
MSAExpand_110	MSAExpand_arrayidx226
MSAExpand_115	MSAExpand_gr232
MSAExpand_119	MSAExpand_gr244
MSAFree_0	MSAFree_aseq
MSAFree_2	MSAFree_sqname
MSAFree_4	MSAFree_sqacc
MSAFree_6	MSAFree_sqdesc
MSAFree_8	MSAFree_ss
MSAFree_10	MSAFree_sa
MSAFree_38	MSAFree_comment
MSAFree_40	MSAFree_gf_tag
MSAFree_42	MSAFree_gf
MSAFree_44	MSAFree_gs_tag
MSAFree_46	MSAFree_gs
MSAFree_49	MSAFree_gc_tag
MSAFree_51	MSAFree_gc
MSAFree_53	MSAFree_gr_tag
MSAFree_55	MSAFree_gr
MSAFree_58	MSAFree_index
MSAFree_59	MSAFree_gs_idx
MSAFree_60	MSAFree_gc_idx
MSAFree_61	MSAFree_gr_idx
MSASetSeqAccession_6	MSASetSeqAccession_sqacc8
MSASetSeqDescription_6	MSASetSeqDescription_sqdesc8
MSAAddComment_6	MSAAddComment_comment6
MSAAddComment_12	MSAAddComment_comment13
MSAVerifyParse_0	MSAVerifyParse_nseq
MSAVerifyParse_5	MSAVerifyParse_sqlen
MSAVerifyParse_8	MSAVerifyParse_aseq
MSAVerifyParse_10	MSAVerifyParse_sqname
MSAVerifyParse_17	MSAVerifyParse_wgt
MSAVerifyParse_19	MSAVerifyParse_sqname24
MSAVerifyParse_25	MSAVerifyParse_sqlen36
MSAVerifyParse_28	MSAVerifyParse_sqname43
MSAVerifyParse_30	MSAVerifyParse_sqlen46
MSAVerifyParse_38	MSAVerifyParse_ss62
MSAVerifyParse_40	MSAVerifyParse_sslen
MSAVerifyParse_43	MSAVerifyParse_sqname74
MSAVerifyParse_45	MSAVerifyParse_sslen77
MSAVerifyParse_53	MSAVerifyParse_sa93
MSAVerifyParse_55	MSAVerifyParse_salen
MSAVerifyParse_58	MSAVerifyParse_sqname105
MSAVerifyParse_60	MSAVerifyParse_salen108
MSAVerifyParse_95	MSAVerifyParse_wgt189
MSAVerifyParse_96	MSAVerifyParse_nseq190
MSAFileOpen_8	MSAFileOpen_dir
MSAFileFormat_0	MSAFileFormat_f
MSAFileRead_0	MSAFileRead_format
MSAGetSeqidx_0	MSAGetSeqidx_nseq
MSAGetSeqidx_1	MSAGetSeqidx_sqname
MSAGetSeqidx_3	MSAGetSeqidx_index
MSAGetSeqidx_4	MSAGetSeqidx_index8
MSAGetSeqidx_6	MSAGetSeqidx_sqname15
MSAFromAINFO_0	MSAFromAINFO_nseq
MSAFromAINFO_3	MSAFromAINFO_aseq2
MSAFromAINFO_6	MSAFromAINFO_wgt
MSAFromAINFO_8	MSAFromAINFO_wgt9
MSAFromAINFO_9	MSAFromAINFO_sqinfo
MSAFromAINFO_10	MSAFromAINFO_sqname
MSAFromAINFO_12	MSAFromAINFO_sqlen
MSAFromAINFO_13	MSAFromAINFO_index
MSAFromAINFO_14	MSAFromAINFO_sqname20
MSAFromAINFO_15	MSAFromAINFO_arrayidx21
MSAFromAINFO_16	MSAFromAINFO_sqinfo24
MSAFromAINFO_18	MSAFromAINFO_sqinfo27
MSAFromAINFO_19	MSAFromAINFO_sqinfo31
MSAFromAINFO_21	MSAFromAINFO_sqinfo38
MSAFromAINFO_22	MSAFromAINFO_sqinfo43
MSAFromAINFO_34	MSAFromAINFO_aseq70
MSAFromAINFO_35	MSAFromAINFO_arrayidx71
MSAFromAINFO_37	MSAFromAINFO_sqinfo74
MSAFromAINFO_38	MSAFromAINFO_ss76
MSAFromAINFO_39	MSAFromAINFO_ss78
MSAFromAINFO_41	MSAFromAINFO_sslen83
MSAFromAINFO_42	MSAFromAINFO_sqinfo87
MSAFromAINFO_54	MSAFromAINFO_aseq121
MSAFromAINFO_55	MSAFromAINFO_arrayidx122
MSAFromAINFO_57	MSAFromAINFO_sqinfo125
MSAFromAINFO_58	MSAFromAINFO_sa127
MSAFromAINFO_59	MSAFromAINFO_sa129
MSAFromAINFO_61	MSAFromAINFO_salen134
MSAFromAINFO_62	MSAFromAINFO_name140
MSAFromAINFO_63	MSAFromAINFO_desc143
MSAFromAINFO_64	MSAFromAINFO_acc146
MSAFromAINFO_65	MSAFromAINFO_au
MSAFromAINFO_66	MSAFromAINFO_cs
MSAFromAINFO_67	MSAFromAINFO_rf
MSAMingap_5	MSAMingap_aseq
MSAMingap_6	MSAMingap_arrayidx
MSAMingap_8	MSAMingap_aseq14
MSAMingap_9	MSAMingap_arrayidx15
MSAMingap_11	MSAMingap_aseq23
MSAMingap_12	MSAMingap_arrayidx24
MSAMingap_14	MSAMingap_aseq32
MSAMingap_15	MSAMingap_arrayidx33
MSAMingap_17	MSAMingap_aseq41
MSAMingap_18	MSAMingap_arrayidx42
MSASmallerAlignment_7	MSASmallerAlignment_aseq17
MSASmallerAlignment_11	MSASmallerAlignment_sqname24
MSASmallerAlignment_12	MSASmallerAlignment_index
MSASmallerAlignment_17	MSASmallerAlignment_wgt33
MSASmallerAlignment_33	MSASmallerAlignment_ss65
MSASmallerAlignment_43	MSASmallerAlignment_sa92
ReadMSF_9	ReadMSF_8
ReadMSF_22	ReadMSF_index
ReadMSF_25	ReadMSF_sqname
ReadMSF_30	ReadMSF_sqname87
ReadMSF_36	ReadMSF_wgt
ReadMSF_50	ReadMSF_index139
ReadMSF_51	ReadMSF_aseq
ReadMSF_52	ReadMSF_sqlen
ReadMSF_55	ReadMSF_sqlen151
ReadMSF_57	ReadMSF_aseq158
ReadMSF_59	ReadMSF_sqname164
ReadMSF_63	ReadMSF_aseq169
ReadMSF_64	ReadMSF_arrayidx170
ReadMSF_68	ReadMSF_sqlen185
ReadMSF_71	ReadMSF_sp
WriteMSF_13	WriteMSF_arrayidx21
WriteMSF_21	WriteMSF_arrayidx50
WriteMSF_35	WriteMSF_arrayidx114
WriteMSF_37	WriteMSF_arrayidx122
WriteMSF_39	WriteMSF_arrayidx130
WriteMSF_41	WriteMSF_arrayidx138
WriteMSF_43	WriteMSF_arrayidx146
WriteMSF_81	WriteMSF_arrayidx258
ReadPhylip_7	ReadPhylip_s
ReadPhylip_12	ReadPhylip_index
ReadPhylip_13	ReadPhylip_sqname
ReadPhylip_19	ReadPhylip_aseq
ReadPhylip_20	ReadPhylip_sqlen
ReadPhylip_23	ReadPhylip_sqlen53
StrDPShuffle_11	StrDPShuffle_arrayidx40
StrDPShuffle_16	StrDPShuffle_arrayidx77
StrDPShuffle_19	StrDPShuffle_arrayidx85
StrDPShuffle_21	StrDPShuffle_arrayidx89
StrDPShuffle_23	StrDPShuffle_arrayidx97
StrDPShuffle_25	StrDPShuffle_arrayidx126
StrDPShuffle_32	StrDPShuffle_arrayidx188
StrDPShuffle_34	StrDPShuffle_arrayidx194
StrDPShuffle_36	StrDPShuffle_arrayidx198
StrDPShuffle_37	StrDPShuffle_arrayidx204
StrDPShuffle_42	StrDPShuffle_arrayidx235
ReadSeq_0	ReadSeq_format1
ReadSeq_1	ReadSeq_msa
ReadSeq_3	ReadSeq_msa2
ReadSeq_5	ReadSeq_msa5
ReadSeq_6	ReadSeq_afp
ReadSeq_8	ReadSeq_msa12
ReadSeq_10	ReadSeq_msa14
ReadSeq_11	ReadSeq_aseq
ReadSeq_12	ReadSeq_arrayidx
ReadSeq_13	ReadSeq_msa15
ReadSeq_15	ReadSeq_msa16
ReadSeq_17	ReadSeq_msa19
ReadSeq_18	ReadSeq_aseq20
ReadSeq_19	ReadSeq_arrayidx21
ReadSeq_21	ReadSeq_msa25
ReadSeq_23	ReadSeq_msa28
ReadSeq_24	ReadSeq_sqname
ReadSeq_26	ReadSeq_msa33
ReadSeq_28	ReadSeq_msa36
ReadSeq_29	ReadSeq_sqname37
ReadSeq_30	ReadSeq_arrayidx38
ReadSeq_31	ReadSeq_msa41
ReadSeq_33	ReadSeq_msa44
ReadSeq_35	ReadSeq_msa47
ReadSeq_36	ReadSeq_sqacc48
ReadSeq_38	ReadSeq_msa53
ReadSeq_40	ReadSeq_msa56
ReadSeq_41	ReadSeq_sqacc57
ReadSeq_42	ReadSeq_arrayidx58
ReadSeq_43	ReadSeq_msa61
ReadSeq_45	ReadSeq_msa65
ReadSeq_47	ReadSeq_msa68
ReadSeq_48	ReadSeq_sqdesc69
ReadSeq_50	ReadSeq_msa74
ReadSeq_52	ReadSeq_msa77
ReadSeq_53	ReadSeq_sqdesc78
ReadSeq_54	ReadSeq_arrayidx79
ReadSeq_55	ReadSeq_msa82
ReadSeq_57	ReadSeq_msa86
ReadSeq_59	ReadSeq_msa89
ReadSeq_60	ReadSeq_ss90
ReadSeq_62	ReadSeq_msa95
ReadSeq_64	ReadSeq_msa98
ReadSeq_65	ReadSeq_aseq99
ReadSeq_66	ReadSeq_arrayidx100
ReadSeq_67	ReadSeq_msa101
ReadSeq_69	ReadSeq_msa103
ReadSeq_71	ReadSeq_msa106
ReadSeq_72	ReadSeq_ss107
ReadSeq_73	ReadSeq_arrayidx108
ReadSeq_75	ReadSeq_msa113
ReadSeq_77	ReadSeq_msa117
ReadSeq_79	ReadSeq_msa120
ReadSeq_80	ReadSeq_sa121
ReadSeq_82	ReadSeq_msa126
ReadSeq_84	ReadSeq_msa129
ReadSeq_85	ReadSeq_aseq130
ReadSeq_86	ReadSeq_arrayidx131
ReadSeq_87	ReadSeq_msa132
ReadSeq_89	ReadSeq_msa134
ReadSeq_91	ReadSeq_msa137
ReadSeq_92	ReadSeq_sa138
ReadSeq_93	ReadSeq_arrayidx139
ReadSeq_95	ReadSeq_msa145
SeqfileFormat_0	SeqfileFormat_buf
SeqfileFormat_5	SeqfileFormat_buf
SeqfileFormat_21	SeqfileFormat_buf
GCGMultchecksum_0	GCGMultchecksum_arrayidx
readGCGdata_4	readGCGdata_3
readGCGdata_11	readGCGdata_10
Free3DArray_1	Free3DArray_arrayidx9
Free3DArray_3	Free3DArray_arrayidx15
sre_fgets_5	sre_fgets_buf
sre_fgets_10	sre_fgets_buf
sre_fgets_13	sre_fgets_buf
sre_strcat_4	sre_strcat_dest
sre_strtok_0	sre_strtok_s
SSIFreeIndex_2	SSIFreeIndex_pkeys
SSIFreeIndex_5	SSIFreeIndex_skeys
SSIFreeIndex_8	SSIFreeIndex_skeys18
SSIFreeIndex_23	SSIFreeIndex_filenames
load_indexfile_41	load_indexfile_filename164
load_indexfile_42	load_indexfile_filename171
load_indexfile_48	load_indexfile_fileformat185
load_indexfile_50	load_indexfile_fileflags193
load_indexfile_52	load_indexfile_bpl201
load_indexfile_54	load_indexfile_rpl209
PopIntStack_1	PopIntStack_nxt1
parse_gs_9	parse_gs_wgt
parse_gr_16	parse_gr_ss35
parse_gr_17	parse_gr_sslen38
parse_gr_20	parse_gr_sslen42
parse_gr_32	parse_gr_sa76
parse_gr_33	parse_gr_salen79
parse_gr_36	parse_gr_salen83
parse_comment_0	parse_comment_s
parse_comment_3	parse_comment_s
parse_sequence_3	parse_sequence_aseq
parse_sequence_4	parse_sequence_sqlen
parse_sequence_7	parse_sequence_sqlen11
VoronoiWeights_4	VoronoiWeights_arrayidx15
VoronoiWeights_7	VoronoiWeights_arrayidx22
VoronoiWeights_35	VoronoiWeights_arrayidx147
VoronoiWeights_44	VoronoiWeights_arrayidx197
BlosumWeights_0	BlosumWeights_nc
BlosumWeights_4	BlosumWeights_c
BlosumWeights_7	BlosumWeights_c
upweight_0	upweight_left
upweight_1	upweight_right
downweight_0	downweight_left
downweight_1	downweight_right
simple_diffmx_6	simple_diffmx_arrayidx26
simple_diffmx_7	simple_diffmx_arrayidx30
EmitSequence_1	EmitSequence_tr
EmitSequence_2	EmitSequence_tr
EmitSequence_26	EmitSequence_tr
EmitSequence_29	EmitSequence_tr
EmitSequence_32	EmitSequence_tr
EmitSequence_36	EmitSequence_tr
EmitSequence_37	EmitSequence_tr
EmitSequence_39	EmitSequence_tr
EmitSequence_41	EmitSequence_tr
EmitConsensusSequence_12	EmitConsensusSequence_tr
EmitConsensusSequence_13	EmitConsensusSequence_tr
EmitConsensusSequence_14	EmitConsensusSequence_tr
EmitConsensusSequence_22	EmitConsensusSequence_tr
EmitConsensusSequence_28	EmitConsensusSequence_tr
EmitConsensusSequence_35	EmitConsensusSequence_tr
EmitConsensusSequence_37	EmitConsensusSequence_tr
EmitConsensusSequence_38	EmitConsensusSequence_tr
EmitConsensusSequence_39	EmitConsensusSequence_tr
EmitConsensusSequence_47	EmitConsensusSequence_tr
