#!/usr/bin/env python3
# emacs: -*- mode: python; py-indent-offset: 4; indent-tabs-mode: nil -*-
# vi: set ft=python sts=4 ts=4 sw=4 et:
from __future__ import print_function
__doc__ = """
This examples performs sifferent kinds of (2D and 3D) plots
of a given activation map.

Needs matplotlib.

Author : Bertrand Thirion, 2012
"""
print(__doc__)

from os import path

try:
    import matplotlib.pyplot as plt
except ImportError:
    raise RuntimeError("This script needs the matplotlib library")

from nibabel import load

from nipy.labs.viz import plot_map, cm

# Local import
from get_data_light import DATA_DIR, get_second_level_dataset

#######################################
# Data and analysis parameters
#######################################

input_image = path.join(DATA_DIR, 'spmT_0029.nii.gz')
if not path.exists(input_image):
    get_second_level_dataset()

brain_map = load(input_image)
vmin, vmax = brain_map.get_data().min(), brain_map.get_data().max()

# make a simple 2D plot
plot_map(brain_map.get_data(), brain_map.get_affine(),
         cmap=cm.cold_hot,
         vmin=vmin,
         vmax=vmax,
         anat=None,
         figure=10,
         threshold=3)

# More plots using 3D
if True:  # replace with False to skip this
    plot_map(brain_map.get_data(), brain_map.get_affine(),
             cmap=cm.cold_hot,
             vmin=vmin,
             vmax=vmax,
             anat=None,
             figure=11,
             threshold=3, do3d=True)

    from nipy.labs import viz3d
    try:
        viz3d.plot_map_3d(brain_map.get_data(), brain_map.get_affine(),
                        cmap=cm.cold_hot,
                        vmin=vmin,
                        vmax=vmax,
                        anat=None,
                        threshold=4)
    except ImportError:
        print("Need mayavi for 3D visualization")

plt.show()
