# macsyfinder 20211008.dev
# models : functional-0.0b2
# /home/bneron/Projects/GEM/MacSyFinder/MacSyFinder/py37/bin/macsyfinder --db-type ordered_replicon --replicon-topology linear --models-dir tests/data/models/ -m functional T12SS-loner-exch --relative-path --sequence-db tests/data/base/test_7.fasta -o functional_test_ordered_1_cluster_3_loners_w_exchangeable
# Systems found:

system id = UserReplicon_T12SS-loner-exch_1
model = functional/T12SS-loner-exch
replicon = UserReplicon
clusters = [('VICH001.B.00001.C001_01397', 'T1SS_abc', 11), ('VICH001.B.00001.C001_01398', 'T1SS_mfp', 12), ('VICH001.B.00001.C001_01399', 'T1SS_abc', 13), ('VICH001.B.00001.C001_01400', 'T2SS_gspD', 14)], [('VICH001.B.00001.C001_01506', 'T1SS_omf', 23)]
occ = 2
wholeness = 1.000
loci nb = 1
score = 3.000

mandatory genes:
	- T1SS_abc: 2 (T1SS_abc, T1SS_abc)
	- T1SS_mfp: 2 (T1SS_mfp, T2SS_gspD)
	- T1SS_omf: 1 (T1SS_omf)

accessory genes:

neutral genes:

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